RNA–Protein interactions for RNA: ENST00000565688.5

CLN3-218, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 650 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-218ENST00000565688 SLC36A3Q495N2 470 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 AWAT1Q58HT5 328 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 LEG1Q6P5S2 330 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.72■□□□□ 0.11
CLN3-218ENST00000565688 FAM86B1Q8N7N1 296 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 SIGLECL1Q8N7X8 197 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 TSSK2Q96PF2 358 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 SLC30A2Q9BRI3 323 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 MYLK2Q9H1R3 596 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 ADA2Q9NZK5 511 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 B9D1Q9UPM9 204 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 PPIAL4AQ9Y536 164 aa15.72■□□□□ 0.11
CLN3-218ENST00000565688 MEGF8Q7Z7M0 2845 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 GADD45GO95257 159 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 GPANK1O95872 356 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 WNT2P09544 360 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 PPIAL4GP0DN37 164 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 RPS2P15880 293 aaKnown RBP15.71■□□□□ 0.11
CLN3-218ENST00000565688 FPR3P25089 353 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 RBMXP38159 391 aaKnown RBP15.71■□□□□ 0.11
CLN3-218ENST00000565688 IFNGR2P38484 337 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 FOXL1Q12952 345 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 KLF17Q5JT82 389 aaPredicted RBP15.71■□□□□ 0.11
CLN3-218ENST00000565688 COLCA1Q6ZS62 124 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 C1orf87Q8N0U7 546 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 OR6V1Q8N148 313 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 SLC26A10Q8NG04 563 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 PYURFQ96I23 114 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 PLEKHA8Q96JA3 519 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 SSBP3Q9BWW4 388 aaPredicted RBP15.71■□□□□ 0.11
CLN3-218ENST00000565688 C1QTNF5Q9BXJ0 243 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 OR52D1Q9H346 318 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 SRA1Q9HD15 236 aaKnown RBP15.71■□□□□ 0.11
CLN3-218ENST00000565688 TMEM100Q9NV29 134 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 ZNF69Q9UC07 566 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 MIOXQ9UGB7 285 aa15.71■□□□□ 0.11
CLN3-218ENST00000565688 A0A1B0GWJ7 208 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 IDH3BO43837 385 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 HKR1P10072 659 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 PRTN3P24158 256 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 NOS3P29474 1203 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 PAX8Q06710 450 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 KRTAP27-1Q3LI81 207 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 CORO6Q6QEF8 472 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 BTNL3Q6UXE8 466 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 LRRN1Q6UXK5 716 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 BHLHE23Q8NDY6 225 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 OR2AJ1Q8NGZ0 328 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 ZNF420Q8TAQ5 688 aaPredicted RBP15.7■□□□□ 0.1
CLN3-218ENST00000565688 MCUR1Q96AQ8 359 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 NMNAT3Q96T66 252 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 PITX2Q99697 317 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 IFT27Q9BW83 186 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 CDADC1Q9BWV3 514 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 TMEM165Q9HC07 324 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 MAGEL2Q9UJ55 1249 aa15.7■□□□□ 0.1
CLN3-218ENST00000565688 H0YL77 283 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 MLNRO43193 412 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 OR10H3O60404 316 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 CYB5R3P00387 301 aaPredicted RBP15.69■□□□□ 0.1
CLN3-218ENST00000565688 SEMG1P04279 462 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 ACSM4P0C7M7 580 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 HIST1H1CP16403 213 aaKnown RBP15.69■□□□□ 0.1
CLN3-218ENST00000565688 EGR1P18146 543 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 GATA4P43694 442 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 GNB2P62879 340 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 SPIBQ01892 262 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 MALLQ13021 153 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 RSPO1Q2MKA7 263 aaPredicted RBP15.69■□□□□ 0.1
CLN3-218ENST00000565688 SLC18B1Q6NT16 456 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 NLRC3Q7RTR2 1065 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 ZBTB46Q86UZ6 589 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 MOGAT3Q86VF5 341 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 KLBQ86Z14 1044 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 RNF148Q8N7C7 305 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 CELF2-AS1Q8N7Q2 184 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 OR52E2Q8NGJ4 325 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 OR4K13Q8NH42 304 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 ERGIC1Q969X5 290 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 ATF6BQ99941 703 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 ELAC2Q9BQ52 826 aaKnown RBP15.69■□□□□ 0.1
CLN3-218ENST00000565688 MS4A7Q9GZW8 240 aaPredicted RBP15.69■□□□□ 0.1
CLN3-218ENST00000565688 RPRD1BQ9NQG5 326 aaKnown RBP15.69■□□□□ 0.1
CLN3-218ENST00000565688 V9GYQ6 96 aa15.69■□□□□ 0.1
CLN3-218ENST00000565688 DNAJC9-AS1A6NH13 148 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 F5H5K5 113 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 F5H5P2 479 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 HSD17B1P14061 328 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 IRF2P14316 349 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 CD80P33681 288 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 MTNR1AP48039 350 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 PAX2Q02962 417 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 BAMBIQ13145 260 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 GK2Q14410 553 aaPredicted RBP15.68■□□□□ 0.1
CLN3-218ENST00000565688 ZNF404Q494X3 552 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 CFAP77Q6ZQR2 320 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 NEIL1Q96FI4 390 aaPredicted RBP15.68■□□□□ 0.1
CLN3-218ENST00000565688 TMEM246Q9BRR3 403 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 ZNF747Q9BV97 191 aa15.68■□□□□ 0.1
CLN3-218ENST00000565688 WDR76Q9H967 626 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms