RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TMEM269A0A1B0GVZ9 245 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 OR4C45A6NMZ5 311 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 LOC110117498-PIK3R3F6TDL0 507 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 GABRPO00591 440 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 SGCEO43556 437 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 GATBO75879 557 aaKnown RBP16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 TOXO94900 526 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 WNT11O96014 354 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 CGAP01215 116 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 GLI4P10075 376 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 CD8BP10966 210 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 HOXB1P14653 301 aaPredicted RBP16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF32P17041 273 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 NCS1P62166 190 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 FOXF2Q12947 444 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 SPCS2Q15005 226 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 THRSPQ92748 146 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 STARD4Q96DR4 205 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 BOD1Q96IK1 185 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 KCTD7Q96MP8 289 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 PLEK2Q9NYT0 353 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 ATPIF1Q9UII2 106 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZGRF1Q86YA3 2104 aa16.69■□□□□ 0.26
CSPG4P13-201ENST00000565545 SC5DO75845 299 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZFPL1O95159 310 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 IL18BPO95998 194 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 ITGA5P08648 1049 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 MMP7P09237 267 aaPredicted RBP16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 ARR3P36575 388 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 PSMA6P60900 246 aaKnown RBP16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 WDR38Q5JTN6 314 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 TMEM53Q6P2H8 277 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 VWA1Q6PCB0 445 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF704Q6ZNC4 412 aaPredicted RBP16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 BTLAQ7Z6A9 289 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 PRSS35Q8N3Z0 413 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 C1orf162Q8NEQ5 155 aaPredicted RBP16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 NANOS1Q8WY41 292 aaKnown RBP16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 HSD17B8Q92506 261 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 BCL2L2Q92843 193 aaPredicted RBP16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 SPTSSAQ969W0 71 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 PDCD1LG2Q9BQ51 273 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 HDHD5Q9BXW7 423 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 OR2H1Q9GZK4 316 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 DCSTAMPQ9H295 470 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 OR52A1Q9UKL2 312 aa16.68■□□□□ 0.26
CSPG4P13-201ENST00000565545 A0A1W2PPW3 197 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 SYNGR3O43761 229 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 UBL3O95164 117 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 PNPP00491 289 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 COX5AP20674 150 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 OPRM1P35372 400 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 KIR3DL2P43630 455 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 CASP6P55212 293 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 FOXG1P55316 489 aaPredicted RBP16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 P2RY6Q15077 328 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 C9orf135Q5VTT2 229 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 TMEM211Q6ICI0 200 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 UNQ9370/PRO34162Q6UXP9 181 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 TMEM91Q6ZNR0 172 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 BEND4Q6ZU67 534 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 ZNF676Q8N7Q3 588 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 IL17RDQ8NFM7 739 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 OR1F12Q8NHA8 337 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 RNF121Q9H920 327 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 G6PC2Q9NQR9 355 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 FAM206AQ9NX38 181 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 GALNT8Q9NY28 637 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 FBXL3Q9UKT7 428 aa16.67■□□□□ 0.26
CSPG4P13-201ENST00000565545 OR6C6A6NF89 314 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 DOK2O60496 412 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 COX5BP10606 129 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 IGHV1-2P23083 117 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 OTX1P32242 354 aaPredicted RBP16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 SERPINB10P48595 397 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 RPS11P62280 158 aaKnown RBP eCLIP16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 PSG4Q00888 419 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 MFGE8Q08431 387 aaPredicted RBP16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 ACSM3Q53FZ2 586 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 BCL2L15Q5TBC7 163 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 TMEM244Q5VVB8 128 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 C22orf42Q6IC83 251 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 NDNFQ8TB73 568 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 TRMT61AQ96FX7 289 aaKnown RBP16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 MED18Q9BUE0 208 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 PIGMQ9H3S5 423 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 SP140LQ9H930 580 aa16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 NUFIP1Q9UHK0 495 aaKnown RBP16.66■□□□□ 0.26
CSPG4P13-201ENST00000565545 INTS1Q8N201 2190 aaKnown RBP16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 A0A096LPE4 126 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 A0A1W2PPZ6 126 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ARL6IP5O75915 188 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 ISG15P05161 165 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 UBCP0CG48 685 aaKnown RBP16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 MAPK3P27361 379 aaPredicted RBP16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 PCSK6P29122 969 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 CX3CR1P49238 355 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 DGUOKQ16854 277 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 KRTAP27-1Q3LI81 207 aa16.65■□□□□ 0.26
CSPG4P13-201ENST00000565545 TBRG1Q3YBR2 411 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms