RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GPR173Q9NS66 373 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 GMDSO60547 372 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 FAM87AP0C7U9 286 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZNF17P17021 662 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 FNTBP49356 437 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TAS2R19P59542 299 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SORDQ00796 357 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR8G1Q15617 311 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ADAM5Q6NVV9 412 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 GSG1LQ6UXU4 331 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NDUFAF7Q7L592 441 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SSX6Q7RTT6 188 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 VN1R4Q7Z5H5 301 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SIAH3Q8IW03 269 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NRMQ8IXM6 262 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CHDHQ8NE62 594 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 MRGPRX4Q96LA9 322 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SNX18Q96RF0 628 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 FAM234AQ9H0X4 552 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SIRT3Q9NTG7 399 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 THAP10Q9P2Z0 257 aaPredicted RBP3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR2AT4A6NND4 320 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ITGAMP11215 1152 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 EPXP11678 715 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 EPHA1P21709 976 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CSN1S1P47710 185 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 PKIAP61925 76 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 H3F3AP84243 136 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 METRNLQ641Q3 311 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TMEM225Q6GV28 225 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 DCXRQ7Z4W1 244 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 C5orf24Q7Z6I8 188 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 LAS2Q8IYD9 372 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SLC7A5P1Q8MH63 180 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 ZNF383Q8NA42 475 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 OR2L8Q8NGY9 312 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 NEIL3Q8TAT5 605 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CCDC74AQ96AQ1 378 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 SLC35A4Q96G79 324 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 CCDC74BQ96LY2 380 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 AGAP4Q96P64 663 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TMEM70Q9BUB7 260 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 MMP28Q9H239 520 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 MED9Q9NWA0 146 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 B3GALT5Q9Y2C3 310 aa3.04□□□□□ -1.92
CHD9-213ENST00000564845 TMEM221A6NGB7 291 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 NKX6-3A6NJ46 265 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 SCO2O43819 266 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 MPDU1O75352 247 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 AQP8O94778 261 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 LALBAP00709 142 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 SERPINA7P05543 415 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 IL7P13232 177 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 OR8B8Q15620 311 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 PNLIPRP3Q17RR3 467 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 CLEC12BQ2HXU8 276 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 TBC1D28Q2M2D7 210 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 GUSBP11Q6P575 273 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 TMEM182Q6ZP80 229 aaPredicted RBP3.03□□□□□ -1.92
CHD9-213ENST00000564845 SLC35F3Q8IY50 421 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 OR13D1Q8NGV5 346 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 UBALD1Q8TB05 177 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 PRRC1Q96M27 445 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 CNTNAP3BQ96NU0 1288 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 EMC6Q9BV81 110 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 CNTNAP3Q9BZ76 1288 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 KIR3DX1Q9H7L2 352 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 ZNF286AQ9HBT8 521 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 HDGFL3Q9Y3E1 203 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 FANCMQ8IYD8 2048 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 SERTM2A0A1B0GWG4 89 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 H0YGG7 62 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 APOA2P02652 100 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 CRHP06850 196 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
CHD9-213ENST00000564845 TIA1P31483 386 aaKnown RBP eCLIP3.03□□□□□ -1.926e-9■■■■■ 31.4
CHD9-213ENST00000564845 DCTDP32321 178 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 GZMMP51124 257 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 MMP15P51511 669 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 RAB1AP62820 205 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 IRF3Q14653 427 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 C3AR1Q16581 482 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 FAM74A3Q4VXF1 159 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 PHF19Q5T6S3 580 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 ARHGAP40Q5TG30 622 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 PRSS45Q7RTY3 260 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 RNF144BQ7Z419 303 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 SLC25A42Q86VD7 318 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 ZNF573Q86YE8 665 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 OR52N2Q8NGI0 321 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 SARAFQ96BY9 339 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 WDR89Q96FK6 387 aaPredicted RBP3.03□□□□□ -1.92
CHD9-213ENST00000564845 PPP1R3EQ9H7J1 279 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 ERVMER34-1Q9H9K5 563 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 C1RLQ9NZP8 487 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 A0A1B0GTQ1 180 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 ODAMA1E959 279 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 PHF1O43189 567 aaPredicted RBP3.03□□□□□ -1.92
CHD9-213ENST00000564845 CD200P41217 278 aa3.03□□□□□ -1.92
CHD9-213ENST00000564845 TNFSF10P50591 281 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms