RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 IVLP07476 585 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 PLEKP08567 350 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 ZDHHC11BP0C7U3 371 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 FOLR1P15328 257 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 FOXN2P32314 431 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 RFX3P48380 749 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 NCBP2P52298 156 aaKnown RBP eCLIP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 NUTF2P61970 127 aaKnown RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 HMGCS1Q01581 520 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 CLINT1Q14677 625 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 SPA17Q15506 151 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 MRPL23Q16540 153 aaKnown RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 RSPO1Q2MKA7 263 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TTLL9Q3SXZ7 439 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TMEM255AQ5JRV8 349 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 FBXL13Q8NEE6 735 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 CD300LFQ8TDQ1 290 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 LINC00167Q96N53 147 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 NAPGQ99747 312 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 RACGAP1Q9H0H5 632 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 OR51M1Q9H341 326 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 HAUS4Q9H6D7 363 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 MED4Q9NPJ6 270 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 RAB20Q9NX57 234 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 CAB39Q9Y376 341 aaPredicted RBP3.04□□□□□ -1.92
LINC00560-201ENST00000564593 TMED5Q9Y3A6 229 aa3.04□□□□□ -1.92
LINC00560-201ENST00000564593 THSD7AQ9UPZ6 1657 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 MYH11P35749 1972 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 TRAV39A0A0B4J263 110 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 TCP11X1B4DZS4 312 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 C11orf94C9JXX5 98 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 MRPS12O15235 138 aaKnown RBP3.03□□□□□ -1.92
LINC00560-201ENST00000564593 UTS2O95399 124 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 KRT14P02533 472 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 ATP5OP48047 213 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 LRRC63Q05C16 580 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 TWF1Q12792 350 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 CAPRIN1Q14444 709 aaKnown RBP3.03□□□□□ -1.92
LINC00560-201ENST00000564593 LY6G6FQ5SQ64 297 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 UBR3Q6ZT12 1888 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 STRADAQ7RTN6 431 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 BLIDQ8IZY5 108 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 Q8N9L7 120 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 OR8K1Q8NGG5 319 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 OR10R2Q8NGX6 335 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF502Q8TBZ5 544 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 MARCH1Q8TCQ1 289 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 SRSF12Q8WXF0 261 aaKnown RBP3.03□□□□□ -1.92
LINC00560-201ENST00000564593 TAAR1Q96RJ0 339 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 CHP1Q99653 195 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 SPZ1Q9BXG8 430 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 ZNF223Q9UK11 482 aaPredicted RBP3.03□□□□□ -1.92
LINC00560-201ENST00000564593 GOLT1BQ9Y3E0 138 aa3.03□□□□□ -1.92
LINC00560-201ENST00000564593 MYH10P35580 1976 aa3.03□□□□□ -1.93
LINC00560-201ENST00000564593 PLIN4Q96Q06 1357 aa3.03□□□□□ -1.93
LINC00560-201ENST00000564593 RBBP6Q7Z6E9 1792 aaKnown RBP3.02□□□□□ -1.93
LINC00560-201ENST00000564593 IGLV11-55A0A075B6I3 123 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 A0A075B6Q4 140 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 TRBV11-1A0A0K0K1C0 115 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF816-ZNF321PA0A0X1KG74 233 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 PLAC8L1A1L4L8 177 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 CD5LO43866 347 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 RRM2P31350 389 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 HRH1P35367 487 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 PRRX1P54821 245 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 C21orf59P57076 290 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 RGS8P57771 180 aaPredicted RBP3.02□□□□□ -1.93
LINC00560-201ENST00000564593 SLC7A9P82251 487 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 GGTLC2Q14390 218 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 CCNJQ5T5M9 372 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 C9orf135Q5VTT2 229 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 LYPD2Q6UXB3 125 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 TIFABQ6ZNK6 161 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 ENTHD1Q8IYW4 607 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF786Q8N393 782 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 CSGALNACT2Q8N6G5 542 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 OR4C5Q8NGB2 326 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 ERMNQ8TAM6 284 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 FAM81AQ8TBF8 368 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 NELFBQ8WX92 580 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.02□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF414Q96IQ9 312 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 CEP170P1Q96L14 293 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 C20orf24Q9BUV8 137 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 TMEM185BQ9H7F4 350 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 ZNF160Q9HCG1 818 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 KCNJ16Q9NPI9 418 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 UXTQ9UBK9 157 aaPredicted RBP3.02□□□□□ -1.93
LINC00560-201ENST00000564593 CD84Q9UIB8 345 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 NACAE9PAV3 2078 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 RGPD3A6NKT7 1758 aaPredicted RBP3.02□□□□□ -1.93
LINC00560-201ENST00000564593 RGPD4Q7Z3J3 1758 aa3.02□□□□□ -1.93
LINC00560-201ENST00000564593 COL1A1P02452 1464 aaPredicted RBP3.02□□□□□ -1.93
LINC00560-201ENST00000564593 PIKFYVEQ9Y2I7 2098 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 TET2Q6N021 2002 aaPredicted RBP3.01□□□□□ -1.93
LINC00560-201ENST00000564593 GLYATL1P3A0A0U1RQE8 302 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 PVALEFA0A1B0GWK0 134 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 ICOSLGO75144 302 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 CLPXO76031 633 aa3.01□□□□□ -1.93
LINC00560-201ENST00000564593 AIFM1O95831 613 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms