RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 PCYOX1LQ8NBM8 494 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 GPR32P1Q8NGA4 272 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 OR4F17Q8NGA8 305 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 OR4D11Q8NGI4 311 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 Q8TCH9 128 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 SLC26A7Q8TE54 656 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 NPRL2Q8WTW4 380 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 ST8SIA4Q92187 359 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 ERGIC1Q969X5 290 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 APOBEC3DQ96AK3 386 aaPredicted RBP6.02□□□□□ -1.45
VPS4A-203ENST00000564399 CLPTM1LQ96KA5 538 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 ZNF583Q96ND8 569 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 OR4F4Q96R69 305 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 ECSITQ9BQ95 431 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 PRSS27Q9BQR3 290 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 CPPED1Q9BRF8 314 aaPredicted RBP6.02□□□□□ -1.45
VPS4A-203ENST00000564399 WACQ9BTA9 647 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 ZNF426Q9BUY5 554 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 HCAR1Q9BXC0 346 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 MMP28Q9H239 520 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 SMURF1Q9HCE7 757 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 KCNK9Q9NPC2 374 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 SIRT7Q9NRC8 400 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 C20orf141Q9NUB4 165 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 VAPAQ9P0L0 249 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 SLAMF8Q9P0V8 285 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 ONECUT1Q9UBC0 465 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 RNF7Q9UBF6 113 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 DNAJB11Q9UBS4 358 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 CORO2BQ9UQ03 480 aa6.02□□□□□ -1.45
VPS4A-203ENST00000564399 TRAV38-1A0A0B4J264 116 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 MEIOCA2RUB1 952 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 A6NIZ1 184 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 IQCF6A8MYZ5 107 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 H3BUX3 64 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 H7C1C5 153 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 J3QW42 95 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 FBP2O00757 339 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 DVL1O14640 695 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 NPFFO15130 113 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 NDUFA2O43678 99 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 FBXO24O75426 580 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 GYPAP02724 150 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 DBHP09172 617 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 HOXB9P17482 250 aaPredicted RBP6.01□□□□□ -1.45
VPS4A-203ENST00000564399 GPX2P18283 190 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CD33P20138 364 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 KIR2DS4P43632 304 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 TAS2R41P59536 307 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CTXN1P60606 82 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 RAP1BP61224 184 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 STX1BP61266 288 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 LCN6P62502 163 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 RAP1AP62834 184 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 GUCA2AQ02747 115 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 PRB3Q04118 309 aaPredicted RBP6.01□□□□□ -1.45
VPS4A-203ENST00000564399 MAB21L1Q13394 359 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 LY6EQ16553 131 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CYP51A1Q16850 503 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CLEC12AQ5QGZ9 265 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 BEND6Q5SZJ8 279 aaPredicted RBP6.01□□□□□ -1.45
VPS4A-203ENST00000564399 LRIF1Q5T3J3 769 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CALHM3Q86XJ0 350 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 NKAIN4Q8IVV8 208 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CMTM4Q8IZR5 234 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CELF2-AS1Q8N7Q2 184 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 C11orf65Q8NCR3 313 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 OR1F12Q8NHA8 337 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 PPP1R35Q8TAP8 253 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 AENQ8WTP8 325 aaKnown RBP6.01□□□□□ -1.45
VPS4A-203ENST00000564399 TMEM255BQ8WV15 326 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 TMEM239Q8WW34 195 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 OCSTAMPQ9BR26 566 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 CENPHQ9H3R5 247 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 IKZF5Q9H5V7 419 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 RERGLQ9H628 205 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 WDR76Q9H967 626 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 FN3KRPQ9HA64 309 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 TRIM36Q9NQ86 728 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 KPTNQ9Y664 436 aa6.01□□□□□ -1.45
VPS4A-203ENST00000564399 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 OR6C6A6NF89 314 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 OOEPA6NGQ2 149 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 RGS16O15492 202 aaPredicted RBP6□□□□□ -1.45
VPS4A-203ENST00000564399 IGLL1P15814 213 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 CD200P41217 278 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 RBM34P42696 430 aaKnown RBP6□□□□□ -1.45
VPS4A-203ENST00000564399 RAD23AP54725 363 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 PRSS12P56730 875 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 POU4F2Q12837 409 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 KLRD1Q13241 179 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 AQP6Q13520 282 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 OR8G1Q15617 311 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 KRT71Q3SY84 523 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 PAGE3Q5JUK9 113 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 OTPQ5XKR4 325 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 PGBD2Q6P3X8 592 aa6□□□□□ -1.45
VPS4A-203ENST00000564399 METAP1DQ6UB28 335 aaPredicted RBP6□□□□□ -1.45
VPS4A-203ENST00000564399 PATL1Q86TB9 770 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms