RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 CX3CR1P49238 355 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ETV1P50549 477 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 TPTEP56180 551 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 CSNK2BP67870 215 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ST3GAL4Q11206 333 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 MED21Q13503 144 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ZNF672Q499Z4 452 aaPredicted RBP13.38□□□□□ -0.27
CDH11-209ENST00000564317 CDONQ4KMG0 1287 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 TP53I3Q53FA7 332 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 DEGS2Q6QHC5 323 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 RHOUQ7L0Q8 258 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ZNF283Q8N7M2 679 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ZNF540Q8NDQ6 660 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 NUP37Q8NFH4 326 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ABHD4Q8TB40 342 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 AKAP1Q92667 903 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH11-209ENST00000564317 SPTSSAQ969W0 71 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 TMEM80Q96HE8 168 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 DCLRE1CQ96SD1 692 aaKnown RBP13.38□□□□□ -0.27
CDH11-209ENST00000564317 DOK1Q99704 481 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 ALG8Q9BVK2 526 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 INPP5EQ9NRR6 644 aa13.38□□□□□ -0.27
CDH11-209ENST00000564317 METTL15A6NJ78 407 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 PTGES3LE9PB15 166 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 SRSF10O75494 262 aaKnown RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 C21orf33P30042 268 aaPredicted RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 THBS4P35443 961 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 UCP2P55851 309 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 OR12D2P58182 307 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 ZNF121P58317 390 aaPredicted RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 SLC35A2P78381 396 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 GALEQ14376 348 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 SNAI3Q3KNW1 292 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 RBM48Q5RL73 367 aaKnown RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 VHLLQ6RSH7 139 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 DRAM2Q6UX65 266 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 COLCA1Q6ZS62 124 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 PRSS45Q7RTY3 260 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 TMEM200AQ86VY9 491 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 SNX33Q8WV41 574 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 RNF166Q96A37 237 aaPredicted RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 C1QTNF5Q9BXJ0 243 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 MROQ9BYG7 248 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 CLEC4MQ9H2X3 399 aaPredicted RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 DUSP21Q9H596 190 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 SCN3BQ9NY72 215 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 ERVK-18Q9QC07 812 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 EIF3KQ9UBQ5 218 aaKnown RBP13.37□□□□□ -0.27
CDH11-209ENST00000564317 CLEC2DQ9UHP7 191 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 POU2F3Q9UKI9 436 aa13.37□□□□□ -0.27
CDH11-209ENST00000564317 RTTNQ86VV8 2226 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 ZNF254O75437 659 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 PNPP00491 289 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 KRT8P05787 483 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 CDK1P06493 297 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 SLC6A9P48067 706 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 RIDAP52758 137 aaKnown RBP13.36□□□□□ -0.27
CDH11-209ENST00000564317 KRTAP10-9P60411 292 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 SPATA46Q5T0L3 261 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.36□□□□□ -0.27
CDH11-209ENST00000564317 STX19Q8N4C7 294 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 YIPF7Q8N8F6 280 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 OR1J1Q8NGS3 322 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 TMEM171Q8WVE6 324 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 C4orf36Q96KX1 117 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 SIGLEC11Q96RL6 698 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 NIPAL2Q9H841 368 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 PLEKHF2Q9H8W4 249 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 ISG20L2Q9H9L3 353 aaKnown RBP13.36□□□□□ -0.27
CDH11-209ENST00000564317 CA10Q9NS85 328 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 ACOXLQ9NUZ1 547 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 TBCCD1Q9NVR7 557 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 ZNF319Q9P2F9 582 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 GNG8Q9UK08 70 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 STARD10Q9Y365 291 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 EXOSC1Q9Y3B2 195 aaKnown RBP13.36□□□□□ -0.27
CDH11-209ENST00000564317 TPRKBQ9Y3C4 175 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 N6AMT1Q9Y5N5 214 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 HECTD1Q9ULT8 2610 aa13.36□□□□□ -0.27
CDH11-209ENST00000564317 HS3ST1O14792 307 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 SULT1C4O75897 302 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 RPP14O95059 124 aaKnown RBP13.35□□□□□ -0.27
CDH11-209ENST00000564317 MT-ND2P03891 347 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 LCATP04180 440 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 LCKP06239 509 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 ANXA2P07355 339 aaKnown RBP13.35□□□□□ -0.27
CDH11-209ENST00000564317 HTR1AP08908 422 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 SSTR2P30874 369 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 DCTDP32321 178 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 GLRXP35754 106 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 PSMB10P40306 273 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 RAD52P43351 418 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 RGS6P49758 472 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 PPP1CBP62140 327 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 DOC2BQ14184 412 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 TMEM255AQ5JRV8 349 aa13.35□□□□□ -0.27
CDH11-209ENST00000564317 OR2G6Q5TZ20 316 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms