RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 NECAP1Q8NC96 275 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 LINC00116Q8NCU8 138 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 OR5AP2Q8NGF4 316 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 OR5D16Q8NGK9 328 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 OR10X1Q8NGY0 326 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 OR2T29Q8NH02 315 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 Q8WTZ3 238 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 EEF1AKMT1Q8WVE0 214 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 ASB10Q8WXI3 467 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 MIB2Q96AX9 1013 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 PIK3IP1Q96FE7 263 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 ACY3Q96HD9 319 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 LOXL4Q96JB6 756 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 TSSK3Q96PN8 268 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 ATOH8Q96SQ7 321 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 INSM2Q96T92 566 aaPredicted RBP4.44□□□□□ -1.7
TCF4-215ENST00000562638 NKX3-1Q99801 234 aaPredicted RBP4.44□□□□□ -1.7
TCF4-215ENST00000562638 CHRDL1Q9BU40 450 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 PBDC1Q9BVG4 233 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 FAIM2Q9BWQ8 316 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 SLC39A8Q9C0K1 460 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 SMDT1Q9H4I9 107 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 TMEM231Q9H6L2 316 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 OR2S2Q9NQN1 319 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 MRPL17Q9NRX2 175 aaKnown RBP4.44□□□□□ -1.7
TCF4-215ENST00000562638 TMEM160Q9NX00 188 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 TAS2R16Q9NYV7 291 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 MTCH1Q9NZJ7 389 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 ABI3Q9P2A4 366 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 ZNF319Q9P2F9 582 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 CLN8Q9UBY8 286 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 LIMD1Q9UGP4 676 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 NAT8Q9UHE5 227 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 CDC42EP3Q9UKI2 254 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 PILRBQ9UKJ0 227 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 B3GALT1Q9Y5Z6 326 aa4.44□□□□□ -1.7
TCF4-215ENST00000562638 COL14A1Q05707 1796 aaKnown RBP4.44□□□□□ -1.7
TCF4-215ENST00000562638 RICTORQ6R327 1708 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 A0A087WZ62 844 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 hCG_38984A0A1B0GV85 526 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 TCRBV5S4A2TA0A5A2 114 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 UBE2QL1A1L167 161 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 TMEM235A6NFC5 223 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ANKUB1A6NFN9 424 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 FAM220BPB1ANY3 271 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ZNF814B7Z6K7 855 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 H7BYZ3 331 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 TNFRSF11BO00300 401 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 HCRTR1O43613 425 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 PLPP2O43688 288 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 GNG7O60262 68 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 GLSO94925 669 aaPredicted RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 NDUFB6O95139 128 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ZIC2O95409 532 aaPredicted RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 CD160O95971 181 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 MT-ND4P03905 459 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ICAM1P05362 532 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 CSF1P09603 554 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 OR4Q2P0C623 313 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ESDP10768 282 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 TPT1P13693 172 aaKnown RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 ATF1P18846 271 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 AZU1P20160 251 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 NME2P22392 152 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 FCARP24071 287 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 IMPA1P29218 277 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 SRD5A2P31213 254 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 GABRA5P31644 462 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 GATA4P43694 442 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 GZMMP51124 257 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 SUMO3P55854 103 aaPredicted RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 RAB38P57729 211 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 SNRPGP62308 76 aaKnown RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 RPS15P62841 145 aaKnown RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 H3F3AP84243 136 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ZXDBP98169 803 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 OC90Q02509 493 aaPredicted RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 BCL2L1Q07817 233 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 PCK2Q16822 640 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.43□□□□□ -1.7
TCF4-215ENST00000562638 C2orf68Q2NKX9 166 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ALKBH6Q3KRA9 238 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ZNF648Q5T619 568 aaPredicted RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 WBP2NLQ6ICG8 309 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ZNF585AQ6P3V2 769 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 SLC27A1Q6PCB7 646 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 PODNL1Q6PEZ8 512 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 FRRS1Q6ZNA5 592 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 TAS1R1Q7RTX1 841 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 NEGR1Q7Z3B1 354 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 CTU1Q7Z7A3 348 aaKnown RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 ZNF546Q86UE3 836 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 LGI3Q8N145 548 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 BEST3Q8N1M1 668 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 C2orf73Q8N5S3 287 aaPredicted RBP4.43□□□□□ -1.7
TCF4-215ENST00000562638 COX18Q8N8Q8 333 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 ACVR1CQ8NER5 493 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 OR4D9Q8NGE8 314 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 OR52L2PQ8NGH6 319 aa4.43□□□□□ -1.7
TCF4-215ENST00000562638 OR14K1Q8NGZ2 314 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms