RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 LYARQ9NX58 379 aaKnown RBP3.99□□□□□ -1.77
SMG1-204ENST00000561940 TBC1D24Q9ULP9 559 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 LRRC37A3O60309 1634 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 PCM1Q15154 2024 aa3.99□□□□□ -1.77
SMG1-204ENST00000561940 TTC41PQ6P2S7 1318 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 PPIP5K1Q6PFW1 1433 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 TNRC6CQ9HCJ0 1690 aaKnown RBP3.98□□□□□ -1.77
SMG1-204ENST00000561940 HUS1O60921 280 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 ICOSLGO75144 302 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 PRPS2P11908 318 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 EIF2S2P20042 333 aaKnown RBP3.98□□□□□ -1.77
SMG1-204ENST00000561940 UBE2AP49459 152 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 CSNK1EP49674 416 aaKnown RBP3.98□□□□□ -1.77
SMG1-204ENST00000561940 ZNF138P52744 262 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 PRPSAP1Q14558 356 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 ITIH4Q14624 930 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 OR52W1Q6IF63 320 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 Q6P435 159 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 OR10J6PQ8NGY7 276 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 MTG1Q9BT17 334 aaPredicted RBP3.98□□□□□ -1.77
SMG1-204ENST00000561940 AGPAT4Q9NRZ5 378 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 MTCH1Q9NZJ7 389 aa3.98□□□□□ -1.77
SMG1-204ENST00000561940 PDP1Q9P0J1 537 aaPredicted RBP3.98□□□□□ -1.77
SMG1-204ENST00000561940 TRPM3Q9HCF6 1732 aaPredicted RBP3.98□□□□□ -1.77
SMG1-204ENST00000561940 LMO7Q8WWI1 1683 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 VPS8Q8N3P4 1428 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 TRPM1Q7Z4N2 1603 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 IGLV11-55A0A075B6I3 123 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.97□□□□□ -1.77
SMG1-204ENST00000561940 K7EMT4 169 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 FKBP6O75344 327 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 CLDN11O75508 207 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 SERPINE2P07093 398 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 OR5H8P0DN80 308 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 ADRB3P13945 408 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 OMGP23515 440 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 CDKN2BP42772 138 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 NAMPTP43490 491 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 CYB561P49447 251 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 RAB9AP51151 201 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 SP4Q02446 784 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 IRF8Q02556 426 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 MAB21L1Q13394 359 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 GGTLC2Q14390 218 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 SF3A2Q15428 464 aaKnown RBP3.97□□□□□ -1.77
SMG1-204ENST00000561940 HSDL1Q3SXM5 330 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 HES5Q5TA89 166 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 TWF2Q6IBS0 349 aaKnown RBP3.97□□□□□ -1.77
SMG1-204ENST00000561940 SMIM5Q71RC9 77 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 C12orf56Q8IXR9 622 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 KATNAL2Q8IYT4 538 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 Q8N976 141 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 BBOF1Q8ND07 529 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 EEF1AKMT3Q96AZ1 226 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 C8orf44Q96CB5 159 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 SLC7A5P2Q9GIP4 190 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 AUNIPQ9H7T9 357 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 SLC40A1Q9NP59 571 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 CCNB1IP1Q9NPC3 277 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 CCDC59Q9P031 241 aaKnown RBP3.97□□□□□ -1.77
SMG1-204ENST00000561940 COL18A1P39060 1754 aa3.97□□□□□ -1.77
SMG1-204ENST00000561940 MN1Q10571 1320 aaPredicted RBP3.96□□□□□ -1.77
SMG1-204ENST00000561940 CASQ2O14958 399 aaPredicted RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 SCAMP2O15127 329 aaKnown RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 TLX1NBP0CAT3 122 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 OR1E1P30953 314 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 MRPL19P49406 292 aaKnown RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 STXBP1P61764 594 aaKnown RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 IL18Q14116 193 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 OR7A5Q15622 319 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 TSPO2Q5TGU0 170 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 AGBL2Q5U5Z8 902 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 CST9Q5W186 159 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 HDDC2Q7Z4H3 204 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 CMC1Q7Z7K0 106 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 ZNF786Q8N393 782 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 OR2A1Q8NGT9 310 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 LKAAEAR1Q8TD35 194 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 BMFQ96LC9 184 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 CHAC1Q9BUX1 264 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 ACTR3CQ9C0K3 210 aaPredicted RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 TPK1Q9H3S4 243 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 TMEM9BQ9NQ34 198 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 C20orf96Q9NUD7 363 aaPredicted RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 AHSPQ9NZD4 102 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 CAB39Q9Y376 341 aaPredicted RBP3.96□□□□□ -1.78
SMG1-204ENST00000561940 E9PCH4 1651 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 NHSQ6T4R5 1651 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 MYO10Q9HD67 2058 aa3.96□□□□□ -1.78
SMG1-204ENST00000561940 ROCK1Q13464 1354 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 IGLV1-36A0A0B4J1U3 117 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 NCF1BA6NI72 391 aaPredicted RBP3.95□□□□□ -1.78
SMG1-204ENST00000561940 NCF1CA8MVU1 366 aaPredicted RBP3.95□□□□□ -1.78
SMG1-204ENST00000561940 ANKRD63C9JTQ0 380 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 INS-IGF2F8WCM5 200 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 SMKR1H3BMG3 65 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 AIREO43918 545 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 CCNB1P14635 433 aa3.95□□□□□ -1.78
SMG1-204ENST00000561940 GGT1P19440 569 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms