RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 IGFBP2P18065 325 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CDC34P49427 236 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CCR8P51685 355 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PRKXP51817 358 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 AP3S2P59780 193 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 RPS15P62841 145 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 SNRPNP63162 240 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPS10P82664 201 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPS11P82912 194 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2F1Q13607 317 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 GTF2H2Q13888 395 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TOMM34Q15785 309 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM35AQ53FP2 167 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PLCXD3Q63HM9 321 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR10K2Q6IF99 312 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 GTF2H2CQ6P1K8 395 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF621Q6ZSS3 439 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ANKRD33Q7Z3H0 272 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF546Q86UE3 836 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 LRRTM1Q86UE6 522 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 NPAS3Q8IXF0 933 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MUC20Q8N307 709 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TRAM1L1Q8N609 369 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 SDR9C7Q8NEX9 313 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR2AK2Q8NG84 335 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 WFIKKN2Q8TEU8 576 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MAFIPQ8WZ33 124 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PPP1R16AQ96I34 528 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 NOL4LQ96MY1 436 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF385AQ96PM9 386 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MTERF1Q99551 399 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 OR51B6Q9H340 312 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 RGCCQ9H4X1 137 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM100Q9NV29 134 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 MRPL22Q9NWU5 206 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 CISD1Q9NZ45 108 aaKnown RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 PADI3Q9ULW8 664 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 COL4A4P53420 1690 aaPredicted RBP6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 FRMPD3Q5JV73 1810 aa6.01□□□□□ -1.45
TSPAN3-209ENST00000560715 TRAV14DV4A0A0A6YYC5 116 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 E7EQ34 232 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 GOSR2O14653 212 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ADAM10O14672 748 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 PCDH7O60245 1069 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SOX14O95416 240 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 F10P00742 488 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 PMP2P02689 132 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 FCGR2BP31994 310 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 MPIP34949 423 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 UBE2G2P60604 165 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNHIT3Q15649 155 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 ACKR1Q16570 336 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 DEFB115Q30KQ5 88 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ZDHHC20Q5W0Z9 365 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM220Q6QAJ8 160 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 DOK3Q7L591 496 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 CDK20Q8IZL9 346 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 CMTM4Q8IZR5 234 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OR10D4PQ8NGN7 298 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 KCNG3Q8TAE7 436 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 LCN9Q8WX39 176 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SMARCD1Q96GM5 515 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 PCED1BQ96HM7 432 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 PRRC1Q96M27 445 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 GPR21Q99679 349 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 FAM110AQ9BQ89 295 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ACBD6Q9BR61 282 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ABHD14AQ9BUJ0 271 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ZNF471Q9BX82 626 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 AUNIPQ9H7T9 357 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TVP23BQ9NYZ1 205 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 FZD4Q9ULV1 537 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TMED7Q9Y3B3 224 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 NLRC5Q86WI3 1866 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 A0A087X0K7 114 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 SEC14L6B5MCN3 397 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 H3BN98 237 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 ARPC3O15145 178 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MOSPD3O75425 235 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 NDUFB6O95139 128 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 HLA-DQB2P05538 268 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 IL6RP08887 468 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 OR4E1P0C645 316 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MAT2AP31153 395 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 CD200P41217 278 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 NDUFA9Q16795 377 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 OLFML2AQ68BL7 652 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 APOOLQ6UXV4 268 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 LINGO4Q6UY18 593 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 VRK3Q8IV63 474 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 GTPBP8Q8N3Z3 284 aaPredicted RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 GEMIN6Q8WXD5 167 aaKnown RBP6□□□□□ -1.45
TSPAN3-209ENST00000560715 FGF11Q92914 225 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 F2RL3Q96RI0 385 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 COPS8Q99627 209 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TMEM208Q9BTX3 173 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 TPT1P8Q9HAU6 139 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 CSNK1G1Q9HCP0 422 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 MAN2C1Q9NTJ4 1040 aa6□□□□□ -1.45
TSPAN3-209ENST00000560715 POT1Q9NUX5 634 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms