RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 OR51V1Q9H2C8 321 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 MED20Q9H944 212 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 WDR76Q9H967 626 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 CENPMQ9NSP4 180 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 PURGQ9UJV8 347 aaKnown RBP11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 KCNS2Q9ULS6 477 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 COMMD3-BMI1R4GMX3 469 aa11.05□□□□□ -0.64
CTDSPL2-209ENST00000560620 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 CLDN25C9JDP6 229 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 PRR23D1E9PI22 279 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 J3QW42 95 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF593O00488 134 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 LILRA1O75019 489 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 CRLF1O75462 422 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 TACSTD2P09758 323 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 PRR23D2P0DMB1 279 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 CRYBB2P43320 205 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 ENTPD1P49961 510 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 BLVRAP53004 296 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 SLC25A1P53007 311 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 TNFAIP6P98066 277 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 MVKQ03426 396 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 MALLQ13021 153 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 KLHL12Q53G59 568 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 AVPI1Q5T686 147 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 SHQ1Q6PI26 577 aaKnown RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 ERI1Q8IV48 349 aaKnown RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 BHLHE23Q8NDY6 225 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 HAVCR1Q96D42 359 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 MSI2Q96DH6 328 aaKnown RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 ELMOD3Q96FG2 381 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 TIMD4Q96H15 378 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 MAP6Q96JE9 813 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF582Q96NG8 517 aaPredicted RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 DDOQ99489 341 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 HCAR1Q9BXC0 346 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 AP4S1Q9Y587 144 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 N6AMT1Q9Y5N5 214 aa11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 YLPM1P49750 1951 aaKnown RBP11.04□□□□□ -0.64
CTDSPL2-209ENST00000560620 M0R135 149 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 LMX1BO60663 402 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 HMGN1P05114 100 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 ACSM4P0C7M7 580 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 RAC2P15153 192 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 FASP25445 335 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 IL2RGP31785 369 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 RPS7P62081 194 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 EIF2B1Q14232 305 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 CHRFAM7AQ494W8 412 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 TMEM236Q5W0B7 351 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR2T2Q6IF00 324 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 ACSM5Q6NUN0 579 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 PLBD1Q6P4A8 553 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 SPATC1Q76KD6 591 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 PEG10Q86TG7 708 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 NAA40Q86UY6 237 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR6N2Q8NGY6 317 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 OR5K1Q8NHB7 308 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 SLAMF6Q96DU3 332 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 NRBF2Q96F24 287 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 ZNF799Q96GE5 643 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 INTS14Q96SY0 518 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 BEX2Q9BXY8 128 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 NMNAT2Q9BZQ4 307 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 SHARPINQ9H0F6 387 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 PAPOLBQ9NRJ5 636 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 CACNG2Q9Y698 323 aa11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 FN1P02751 2386 aaKnown RBP11.03□□□□□ -0.64
CTDSPL2-209ENST00000560620 ISPDA4D126 451 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 G3V2T6 193 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 SURF4O15260 269 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 RP2O75695 350 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 TNFRSF1AP19438 455 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 KITLGP21583 273 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 HSD11B1P28845 292 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 GSTT1P30711 240 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 PRKXP51817 358 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 ATP6AP1Q15904 470 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 RSPO1Q2MKA7 263 aaPredicted RBP11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 FBXW12Q6X9E4 464 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 PGAP1Q75T13 922 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF771Q7L3S4 317 aaPredicted RBP11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 MRPL21Q7Z2W9 205 aaKnown RBP11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 AMIGO2Q86SJ2 522 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 HIPK1Q86Z02 1210 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZDHHC13Q8IUH4 622 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 CLDND2Q8NHS1 167 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 DNAJC9Q8WXX5 260 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 HPS1Q92902 700 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 RAB1CQ92928 201 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 SOX7Q9BT81 388 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 NTN4Q9HB63 628 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 KRT84Q9NSB2 600 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 TVP23BQ9NYZ1 205 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 CDC42EP3Q9UKI2 254 aa11.02□□□□□ -0.65
CTDSPL2-209ENST00000560620 ZNF878C9JN71 531 aa11.01□□□□□ -0.65
CTDSPL2-209ENST00000560620 GLCEO94923 617 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms