RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 SRA1Q9HD15 236 aaKnown RBP11.91□□□□□ -0.5
TPM1-223ENST00000560445 OR5V1Q9UGF6 321 aa11.91□□□□□ -0.5
TPM1-223ENST00000560445 LRCH1Q9Y2L9 728 aa11.91□□□□□ -0.5
TPM1-223ENST00000560445 LHFPL6Q9Y693 200 aa11.91□□□□□ -0.5
TPM1-223ENST00000560445 CACNG2Q9Y698 323 aa11.91□□□□□ -0.5
TPM1-223ENST00000560445 WNK2Q9Y3S1 2297 aa11.91□□□□□ -0.5
TPM1-223ENST00000560445 IQCF6A8MYZ5 107 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 TNFRSF11BO00300 401 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 CCNB2O95067 398 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 FSTL3O95633 263 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 IFNGP01579 166 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 IGHV2-70P01814 119 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 HIST1H1CP16403 213 aaKnown RBP11.9□□□□□ -0.5
TPM1-223ENST00000560445 FXYD6P3P58550 94 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 MZT1Q08AG7 82 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 KCNJ8Q15842 424 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 FAM98BQ52LJ0 330 aaKnown RBP11.9□□□□□ -0.5
TPM1-223ENST00000560445 NLRC3Q7RTR2 1065 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.9□□□□□ -0.5
TPM1-223ENST00000560445 OR6V1Q8N148 313 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 CELF2-AS1Q8N7Q2 184 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 CCDC197Q8NCU1 140 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 PROKR2Q8NFJ6 384 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 OR11L1Q8NGX0 322 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 C1QTNF5Q9BXJ0 243 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 OPA3Q9H6K4 179 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 TMEM100Q9NV29 134 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 PTTG3PQ9NZH4 202 aa11.9□□□□□ -0.5
TPM1-223ENST00000560445 FAM107AO95990 144 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 CALB2P22676 271 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 HMGA2P52926 109 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 HILS1P60008 231 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 ACTG1P63261 375 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.89□□□□□ -0.51
TPM1-223ENST00000560445 ZNF181Q2M3W8 571 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 SLC18B1Q6NT16 456 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 PGBD2Q6P3X8 592 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 C12orf54Q6X4T0 127 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 COLCA1Q6ZS62 124 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 MRPL21Q7Z2W9 205 aaKnown RBP11.89□□□□□ -0.51
TPM1-223ENST00000560445 LRRC28Q86X40 367 aaPredicted RBP11.89□□□□□ -0.51
TPM1-223ENST00000560445 FITM2Q8N6M3 262 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 SDR9C7Q8NEX9 313 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 OR52E2Q8NGJ4 325 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 SPRYD4Q8WW59 207 aaPredicted RBP11.89□□□□□ -0.51
TPM1-223ENST00000560445 ITLN1Q8WWA0 313 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 LRGUKQ96M69 825 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 TSSK2Q96PF2 358 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 GPA33Q99795 319 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 SLC30A2Q9BRI3 323 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 TMPRSS13Q9BYE2 586 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 REEP1Q9H902 201 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 SP140LQ9H930 580 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 ZMAT3Q9HA38 289 aaKnown RBP11.89□□□□□ -0.51
TPM1-223ENST00000560445 PATZ1Q9HBE1 687 aaKnown RBP11.89□□□□□ -0.51
TPM1-223ENST00000560445 TRIM36Q9NQ86 728 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 TBC1D23Q9NUY8 699 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 MIOXQ9UGB7 285 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 CYB5R1Q9UHQ9 305 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 POLR3KQ9Y2Y1 108 aaPredicted RBP11.89□□□□□ -0.51
TPM1-223ENST00000560445 LYVE1Q9Y5Y7 322 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 DYSFO75923 2080 aa11.89□□□□□ -0.51
TPM1-223ENST00000560445 LOC105371242A0A075B767 164 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 A8MXK9 166 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 F5H5K5 113 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 APOC1P02654 83 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 LCATP04180 440 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 MMP16P51512 607 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 LCN2P80188 198 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 TRAP1Q12931 704 aaKnown RBP11.88□□□□□ -0.51
TPM1-223ENST00000560445 TMEM255AQ5JRV8 349 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 OR2T2Q6IF00 324 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 BTNL3Q6UXE8 466 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 CYP2R1Q6VVX0 501 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 Q6ZR03 302 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 RASSF6Q6ZTQ3 369 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 PGAP1Q75T13 922 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 DHFR2Q86XF0 187 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 OR5AS1Q8N127 324 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 OR2T33Q8NG76 320 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 FAM216AQ8WUB2 273 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 SLC7A6Q92536 515 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 ZMYND19Q96E35 227 aaPredicted RBP11.88□□□□□ -0.51
TPM1-223ENST00000560445 MEGF10Q96KG7 1140 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 GCM1Q9NP62 436 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 IL20Q9NYY1 176 aa11.88□□□□□ -0.51
TPM1-223ENST00000560445 PRPF19Q9UMS4 504 aaKnown RBP11.88□□□□□ -0.51
TPM1-223ENST00000560445 CUBNO60494 3623 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.87□□□□□ -0.51
TPM1-223ENST00000560445 OR6C68A6NDL8 312 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 RIIAD1A6NNX1 92 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 M0R135 149 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 DBHP09172 617 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 ACSM4P0C7M7 580 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 ZNF3P17036 446 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 ADRA2CP18825 462 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 FMO3P31513 532 aa11.87□□□□□ -0.51
TPM1-223ENST00000560445 MAGEA2P43356 314 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms