RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ALDH3B1P43353 468 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 RPS5P46782 204 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 EVX1P49640 407 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 SH3BGRP55822 239 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 RPS23P62266 143 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF91Q05481 1191 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 RPL18Q07020 188 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 IRF3Q14653 427 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 SLC17A1Q14916 467 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 KLHL22Q53GT1 634 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 AVPI1Q5T686 147 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 KCTD8Q6ZWB6 473 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 H1FNTQ75WM6 255 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 DOK3Q7L591 496 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 FAM169BQ8N8A8 192 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 TMIGD2Q96BF3 282 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 BOD1Q96IK1 185 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 ALKBH3Q96Q83 286 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 SYT3Q9BQG1 590 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 ASPNQ9BXN1 380 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 MRPL37Q9BZE1 423 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 NMNAT2Q9BZQ4 307 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 OR11A1Q9GZK7 315 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 SEC61A2Q9H9S3 476 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 NOX3Q9HBY0 568 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 FGF20Q9NP95 211 aaPredicted RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 HINT3Q9NQE9 182 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 WARS2Q9UGM6 360 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 NUP50Q9UKX7 468 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 DIMT1Q9UNQ2 313 aaKnown RBP7.93□□□□□ -1.14
SMAD3-215ENST00000560424 SNX5Q9Y5X3 404 aa7.93□□□□□ -1.14
SMAD3-215ENST00000560424 PTGES3LE9PB15 166 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PLPP3O14495 311 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 TPD52L2O43399 206 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 AHCYL1O43865 530 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 CDC14BO60729 498 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PPP1R3DO95685 299 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 CELA3BP08861 270 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 IMPDH2P12268 514 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 CBR1P16152 277 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PAICSP22234 425 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 SLC2A5P22732 501 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 OMGP23515 440 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 DCKP27707 260 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 NOS3P29474 1203 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 GRPRP30550 384 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 AQP2P41181 271 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 MTNR1AP48039 350 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 SLC25A1P53007 311 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 MRPS11P82912 194 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 H3F3AP84243 136 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 GALK2Q01415 458 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 EMX1Q04741 257 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PUDPQ08623 228 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 ST3GAL4Q11206 333 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 SLC35D3Q5M8T2 416 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 SYT6Q5T7P8 510 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 UBE2UQ5VVX9 321 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 FAM205BPQ63HN1 556 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 TMEM225Q6GV28 225 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 NIPAL3Q6P499 406 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PAQR6Q6TCH4 344 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 AHSA2Q719I0 299 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 MEPCEQ7L2J0 689 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PXKQ7Z7A4 578 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 ADCK1Q86TW2 530 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 EGFL6Q8IUX8 553 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 C10orf53Q8N6V4 93 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 NPEPL1Q8NDH3 523 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 OR9K2Q8NGE7 335 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 ST7LQ8TDW4 575 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 DVL3Q92997 716 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 PTP4A1Q93096 173 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 YIPF5Q969M3 257 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 MUL1Q969V5 352 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 TIMD4Q96H15 378 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 ERMAPQ96PL5 475 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 TAPBPLQ9BX59 468 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 MS4A7Q9GZW8 240 aaPredicted RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 RBM38Q9H0Z9 239 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 TXNIPQ9H3M7 391 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 BEX1Q9HBH7 125 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 ACOT13Q9NPJ3 140 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 DNAJC27Q9NZQ0 273 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 AASSQ9UDR5 926 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 IL20RAQ9UHF4 553 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 GPR160Q9UJ42 338 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 ZNF346Q9UL40 294 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 EXOGQ9Y2C4 368 aaKnown RBP7.92□□□□□ -1.14
SMAD3-215ENST00000560424 IER3IP1Q9Y5U9 82 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 WNK2Q9Y3S1 2297 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 WNK1Q9H4A3 2382 aa7.92□□□□□ -1.14
SMAD3-215ENST00000560424 NBEAL2Q6ZNJ1 2754 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 CLDN25C9JDP6 229 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 PRR23D1E9PI22 279 aaPredicted RBP7.91□□□□□ -1.14
SMAD3-215ENST00000560424 BLOC1S5-TXNDC5H3BN57 136 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 J3QRE1 110 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 M0R082 166 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 M0R129 80 aa7.91□□□□□ -1.14
SMAD3-215ENST00000560424 SEC14L2O76054 403 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms