RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 FBXL3Q9UKT7 428 aa9.34□□□□□ -0.91
CRTC3-209ENST00000560320 SLC22A13Q9Y226 551 aa9.34□□□□□ -0.91
CRTC3-209ENST00000560320 CMAHPQ9Y471 501 aa9.34□□□□□ -0.91
CRTC3-209ENST00000560320 TIMM10BQ9Y5J6 103 aa9.34□□□□□ -0.91
CRTC3-209ENST00000560320 PMF1-BGLAPU3KQ54 211 aa9.34□□□□□ -0.91
CRTC3-209ENST00000560320 FLNCQ14315 2725 aa9.34□□□□□ -0.91
CRTC3-209ENST00000560320 A0A1W2PPK0 400 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 FIGNL2A6NMB9 653 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 K7EM74 188 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 DOK2O60496 412 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 WDR1O75083 606 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 WNT11O96014 354 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 PNPP00491 289 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ANXA2P07355 339 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 HOXD4P09016 255 aaPredicted RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ABOP16442 354 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 SRMP19623 302 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 MPGP29372 298 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 OR3A2P47893 321 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 SLC6A9P48067 706 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 PSMD7P51665 324 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 BMXP51813 675 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 TPTEP56180 551 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 RPS11P62280 158 aaKnown RBP eCLIP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 PPP3R1P63098 170 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 HIST1H3AP68431 136 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 GALK2Q01415 458 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 TGFBR3Q03167 851 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 EIF2S3LQ2VIR3 472 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ACSF3Q4G176 576 aaPredicted RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 IDNKQ5T6J7 187 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 DDI2Q5TDH0 399 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 HIST2H3PS2Q5TEC6 136 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 FBXW9Q5XUX1 488 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 NSUN5P2Q63ZY6 315 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 HIST2H3AQ71DI3 136 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 NUFIP2Q7Z417 695 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ADGRE4PQ86SQ3 457 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 COMMD2Q86X83 199 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ELMOD2Q8IZ81 293 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 IL17RDQ8NFM7 739 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 OR10S1Q8NGN2 331 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 OR13C3Q8NGS6 347 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 SNRNP27Q8WVK2 155 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 NANOS1Q8WY41 292 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ZNF837Q96EG3 531 aaPredicted RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 PGAM5Q96HS1 289 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 DCLRE1CQ96SD1 692 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 SH3GL3Q99963 347 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 PBOV1Q9GZY1 135 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 ZNF71Q9NQZ8 489 aaPredicted RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 DDX28Q9NUL7 540 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 LUZP4Q9P127 313 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 NUFIP1Q9UHK0 495 aaKnown RBP9.33□□□□□ -0.92
CRTC3-209ENST00000560320 SLC5A6Q9Y289 635 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 N6AMT1Q9Y5N5 214 aa9.33□□□□□ -0.92
CRTC3-209ENST00000560320 LOC107986453A0A1B0GWG9 222 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 SMIM30A4D0T7 59 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 OR6C6A6NF89 314 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ANXA2P2A6NMY6 339 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 NOTOA8MTQ0 251 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 VGLL3A8MV65 326 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 TMEM127O75204 238 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 SRSF10O75494 262 aaKnown RBP9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ISG15P05161 165 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ZNF32P17041 273 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 CTSSP25774 331 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ARR3P36575 388 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 RANBP1P43487 201 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 HTR5AP47898 357 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ZNF121P58317 390 aaPredicted RBP9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ZNF45Q02386 682 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 PLP2Q04941 152 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 CCDC92Q53HC0 331 aaPredicted RBP9.32□□□□□ -0.92
CRTC3-209ENST00000560320 FAM27D1Q5T7N8 215 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 C9orf135Q5VTT2 229 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 C16orf87Q6PH81 154 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 FAM57BQ71RH2 274 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 LINGO2Q7L985 606 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 CNEP1R1Q8N9A8 125 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 CCDC54Q8NEL0 328 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 OR6K3Q8NGY3 331 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 OR1F12Q8NHA8 337 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 RGP1Q92546 391 aaPredicted RBP9.32□□□□□ -0.92
CRTC3-209ENST00000560320 TMEM106AQ96A25 262 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 FBXO17Q96EF6 278 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 ZFP3Q96NJ6 502 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 BARHL1Q9BZE3 327 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 SLC24A3Q9HC58 644 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 PNRC2Q9NPJ4 139 aaKnown RBP9.32□□□□□ -0.92
CRTC3-209ENST00000560320 G6PC2Q9NQR9 355 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 FAM206AQ9NX38 181 aa9.32□□□□□ -0.92
CRTC3-209ENST00000560320 TRBV5-7A0A0A0MS05 114 aa9.31□□□□□ -0.92
CRTC3-209ENST00000560320 MEGF11A6BM72 1044 aa9.31□□□□□ -0.92
CRTC3-209ENST00000560320 F5H5K5 113 aa9.31□□□□□ -0.92
CRTC3-209ENST00000560320 M0R135 149 aa9.31□□□□□ -0.92
CRTC3-209ENST00000560320 P2RY10O00398 339 aa9.31□□□□□ -0.92
CRTC3-209ENST00000560320 PRRG2O14669 202 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms