RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 PNPP00491 289 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 CGAP01215 116 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 HLA-DPB1P04440 258 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 PATE4P0C8F1 98 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 ZNF32P17041 273 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 DDOSTP39656 456 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 ETV6P41212 452 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 PCBD1P61457 104 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 FABP5Q01469 135 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 SCRN3Q0VDG4 424 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 CDK10Q15131 360 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 TAF13Q15543 124 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 TRAM1Q15629 374 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 ELFN2Q5R3F8 820 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 RSBN1Q5VWQ0 802 aaPredicted RBP9.83□□□□□ -0.84
USP3-218ENST00000560202 SIGIRRQ6IA17 410 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 CD200R1LQ6Q8B3 271 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 Q6ZT83 130 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 USP43Q70EL4 1123 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 POC5Q8NA72 575 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 OR1K1Q8NGR3 316 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 OR2G2Q8NGZ5 317 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 MCFD2Q8NI22 146 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 FGFBP3Q8TAT2 258 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 TRMT61AQ96FX7 289 aaKnown RBP9.83□□□□□ -0.84
USP3-218ENST00000560202 C4orf45Q96LM5 186 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 PDCD1LG2Q9BQ51 273 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 CCDC32Q9BV29 185 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 HDHD5Q9BXW7 423 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 NXF2Q9GZY0 626 aaKnown RBP9.83□□□□□ -0.84
USP3-218ENST00000560202 NIPAL2Q9H841 368 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 DDX28Q9NUL7 540 aaKnown RBP9.83□□□□□ -0.84
USP3-218ENST00000560202 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
USP3-218ENST00000560202 PROCRQ9UNN8 238 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 SLC5A6Q9Y289 635 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 TIMM10BQ9Y5J6 103 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 R4GMQ9 66 aa9.83□□□□□ -0.84
USP3-218ENST00000560202 TMEM269A0A1B0GVZ9 245 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 TRDV1A0A1B0GX56 115 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 GPRIN2O60269 458 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 ZFPL1O95159 310 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 MMP7P09237 267 aaPredicted RBP9.82□□□□□ -0.84
USP3-218ENST00000560202 IGHV1-2P23083 117 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 HSD11B1P28845 292 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 S100A5P33763 92 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 RCVRNP35243 200 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 TGFBR1P36897 503 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 CCR9P51686 369 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 MFGE8Q08431 387 aaPredicted RBP9.82□□□□□ -0.84
USP3-218ENST00000560202 SLC36A2Q495M3 483 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 FAM209AQ5JX71 171 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 ANKRD16Q6P6B7 361 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 PRSS35Q8N3Z0 413 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 MS4A15Q8N5U1 240 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 ZNF610Q8N9Z0 462 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 SPERTQ8NA61 448 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 ST6GALNAC3Q8NDV1 305 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 ABHD4Q8TB40 342 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 SUN5Q8TC36 379 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 BCL2L2Q92843 193 aaPredicted RBP9.82□□□□□ -0.84
USP3-218ENST00000560202 DCLRE1CQ96SD1 692 aaKnown RBP9.82□□□□□ -0.84
USP3-218ENST00000560202 COQ7Q99807 217 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 ATF6BQ99941 703 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 OR2H1Q9GZK4 316 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 RNF167Q9H6Y7 350 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 TXNL4BQ9NX01 149 aaKnown RBP9.82□□□□□ -0.84
USP3-218ENST00000560202 PLEK2Q9NYT0 353 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 SH3BGRL2Q9UJC5 107 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 PEX16Q9Y5Y5 336 aa9.82□□□□□ -0.84
USP3-218ENST00000560202 OR4C45A6NMZ5 311 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 CENPXA8MT69 81 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 GABRPO00591 440 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 SGCEO43556 437 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 RGS9O75916 674 aaPredicted RBP9.81□□□□□ -0.84
USP3-218ENST00000560202 CD8BP10966 210 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 GALP22466 123 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 CTSSP25774 331 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 FGF9P31371 208 aaPredicted RBP9.81□□□□□ -0.84
USP3-218ENST00000560202 KIR3DL2P43630 455 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 MMP16P51512 607 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 PRKXP51817 358 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 GRB2P62993 217 aaKnown RBP9.81□□□□□ -0.84
USP3-218ENST00000560202 PSG4Q00888 419 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 TGFBR3Q03167 851 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 PMPCAQ10713 525 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 INSL4Q14641 139 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 RAB35Q15286 201 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 SMUG1Q53HV7 270 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 WDR38Q5JTN6 314 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 ZNF774Q6NX45 483 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 XKRXQ6PP77 449 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 TMEM91Q6ZNR0 172 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 CATSPERDQ86XM0 798 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 IL17RDQ8NFM7 739 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 KBTBD8Q8NFY9 601 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 OR5AK2Q8NH90 309 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 NDNFQ8TB73 568 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 PPP1R14AQ96A00 147 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 CNTNAP3BQ96NU0 1288 aa9.81□□□□□ -0.84
USP3-218ENST00000560202 KCNJ15Q99712 375 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms