RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZP3P21754 424 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 TNFRSF4P43489 277 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 RPL29P47914 159 aaKnown RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 RHOBP62745 196 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 AANATQ16613 207 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZNF385BQ569K4 471 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZNF775Q96BV0 537 aaPredicted RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 CLEC5AQ9NY25 188 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLC45A1Q9Y2W3 748 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 AP4M1O00189 453 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 FCN1O00602 326 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 CMTM4Q8IZR5 234 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM71CQ8NEG0 241 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 NDRG4Q9ULP0 352 aaKnown RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 A0A1B0GTW7 788 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 LMX1BO60663 402 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 ACAA2P42765 397 aaKnown RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 RPL30P62888 115 aaKnown RBP12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 ERV3-1Q14264 604 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 TAZQ16635 292 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 TCEAL8Q8IYN2 117 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 IGSF21Q96ID5 467 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 CTSFQ9UBX1 484 aa12.68□□□□□ -0.38
CSPG4P12-202ENST00000559989 RBP4P02753 201 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 MMP11P24347 488 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 SNRPGP62308 76 aaKnown RBP12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 C21orf62-AS1Q17RA5 79 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 CALHM3Q86XJ0 350 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 MRPS2Q9Y399 296 aaKnown RBP12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 NPTNQ9Y639 398 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 SELENOFO60613 162 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 DAPP51397 102 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 ACY3Q96HD9 319 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 TNFRSF13CQ96RJ3 184 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 PRSS16Q9NQE7 514 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 UFC1Q9Y3C8 167 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 FOXK2Q01167 660 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 RBPMS2Q6ZRY4 209 aaKnown RBP12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 A4GALTQ9NPC4 353 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 TFAP2AP05549 437 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 IHHQ14623 411 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 EDARADDQ8WWZ3 215 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 POM121Q96HA1 1249 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 AKIRIN1Q9H9L7 192 aaPredicted RBP12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 MMACHCQ9Y4U1 282 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 PIGPP57054 158 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 GALMQ96C23 342 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 TAS2R4Q9NYW5 299 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM72CH0Y354 149 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 SDHBP21912 280 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 PPP1CAP62136 330 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 FUT2Q10981 343 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM72AQ5TYM5 149 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM72DQ6L9T8 149 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 FAM72BQ86X60 149 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 C19orf47Q8N9M1 422 aaKnown RBP12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 CHST14Q8NCH0 376 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLC22A13Q9Y226 551 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 C10orf71Q711Q0 1435 aa12.67□□□□□ -0.38
CSPG4P12-202ENST00000559989 SNRPGP15A8MWD9 76 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 BCL2L11O43521 198 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 WDR1O75083 606 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 SCRG1O75711 98 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 KLF7O75840 302 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TOMM34Q15785 309 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TGIF2LYQ8IUE0 185 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 MOGAT1Q96PD6 335 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TINAGL1Q9GZM7 467 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 MEIKINA0A087WXM9 373 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 MRAP2Q96G30 205 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 RNF2Q99496 336 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 FKBP11Q9NYL4 201 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 RHBDL1O75783 438 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 ANKRD16Q6P6B7 361 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 CLEC14AQ86T13 490 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 MUC15Q8N387 334 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR4S1Q8NGB4 309 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR10A7Q8NGE5 316 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 LCORQ96JN0 433 aaPredicted RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 PLSCR3Q9NRY6 295 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 RCL1Q9Y2P8 373 aaKnown RBP12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 ZNF840PA6NDX5 716 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 COX6CP09669 75 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 SHHQ15465 462 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 LEXMQ3ZCV2 418 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 CARFQ8N187 725 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TMEM37Q8WXS4 190 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 C12orf42Q96LP6 360 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TPSD1Q9BZJ3 242 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 INHBCP55103 352 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
CSPG4P12-202ENST00000559989 SLCO4A1Q96BD0 722 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms