RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 ANGPT4Q9Y264 503 aa4.89□□□□□ -1.63
USP3-215ENST00000559771 SOX21Q9Y651 276 aaPredicted RBP4.89□□□□□ -1.63
USP3-215ENST00000559771 TGP01266 2768 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 VWFP04275 2813 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 A0A0G2JMP0 313 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 A0A0X1KG70 313 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 CENPBD1B2RD01 187 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 CLDN25C9JDP6 229 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 BLOC1S5-TXNDC5H3BN57 136 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 TRIM77I1YAP6 450 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SOCS2O14508 198 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 GSTA4O15217 222 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SPRY3O43610 288 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 PIP5K1CO60331 668 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 MRPS14O60783 128 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 OR7A10O76100 309 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 OR6A2O95222 327 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 FARS2O95363 451 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 IGF2P01344 180 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 IGHV2-70P01814 119 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 CD55P08174 381 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 STOMP27105 288 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 RAD52P43351 418 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 ALDH3B2P48448 385 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 ZNF81P51508 661 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 ARHGDIAP52565 204 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 CLRN1P58418 232 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 ERVK-25P63136 954 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 LCN2P80188 198 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 PAX2Q02962 417 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 TOP3AQ13472 1001 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 PIN1Q13526 163 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 ENDOGQ14249 297 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 TBC1D28Q2M2D7 210 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 VMACQ2NL98 169 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 HFEQ30201 348 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 RABL3Q5HYI8 236 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 FAM209AQ5JX71 171 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 FAM27BQ5VT28 67 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 DCAF12L2Q5VW00 463 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 FOXB2Q5VYV0 432 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 MBNL2Q5VZF2 373 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 TMEM53Q6P2H8 277 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 FOXL2NBQ6ZUU3 175 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 NANOGNBQ7Z5D8 188 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 AMIGO2Q86SJ2 522 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 ERI1Q8IV48 349 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 BCL6BQ8N143 479 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 OR4M2Q8NGB6 313 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 OR1J2Q8NGS2 313 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 OR10A6Q8NH74 314 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SGMS2Q8NHU3 365 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 ZNF420Q8TAQ5 688 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 KLF14Q8TD94 323 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 CCL17Q92583 94 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 DACT3Q96B18 629 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 RAB39BQ96DA2 213 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 NRBF2Q96F24 287 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 WDR89Q96FK6 387 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 FANCD2OSQ96PS1 177 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SIGLEC11Q96RL6 698 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SLC29A1Q99808 456 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 RBM4BQ9BQ04 359 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 ZNF747Q9BV97 191 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 RBM4Q9BWF3 364 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 OR2H1Q9GZK4 316 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SEMA6AQ9H2E6 1030 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 C1orf198Q9H425 327 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 RNF121Q9H920 327 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SAP30LQ9HAJ7 183 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SIAEQ9HAT2 523 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SMURF2Q9HAU4 748 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 MSL2Q9HCI7 577 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 INIPQ9NRY2 104 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 DCAF13Q9NV06 445 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 ZNF69Q9UC07 566 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 RPS6KA6Q9UK32 745 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SLC13A4Q9UKG4 626 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 BLOC1S6Q9UL45 172 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 OAZ3Q9UMX2 235 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 SAMD4AQ9UPU9 718 aaKnown RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 POLR3KQ9Y2Y1 108 aaPredicted RBP4.88□□□□□ -1.63
USP3-215ENST00000559771 PPIAL4AQ9Y536 164 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 PCDHGB1Q9Y5G3 927 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 HSPE1-MOB4S4R3N1 261 aa4.88□□□□□ -1.63
USP3-215ENST00000559771 WNK2Q9Y3S1 2297 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 PPIAL4EA0A075B759 164 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 PPIAL4CA0A0B4J2A2 164 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 IQCMA0A1B0GVH7 501 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 A0A1W2PRG6 482 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 C5orf49A4QMS7 147 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 DNAJC9-AS1A6NH13 148 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 NPIPB4C9JG80 1138 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 F5H0A9 414 aaPredicted RBP4.87□□□□□ -1.63
USP3-215ENST00000559771 PPIAL4DF5H284 164 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 G3V2T6 193 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 CXCR6O00574 342 aa4.87□□□□□ -1.63
USP3-215ENST00000559771 DLGAP1O14490 977 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms