RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 FAM183AA6NL82 134 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 J3QW42 95 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 WNT9BO14905 357 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SURF4O15260 269 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 GSC2O15499 205 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 LCATP04180 440 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 FAM157CP0CG43 387 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 CLUP10909 449 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SPI1P17947 270 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SRD5A1P18405 259 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 KITLGP21583 273 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 PAICSP22234 425 aaKnown RBP6.96□□□□□ -1.3
SNX1-207ENST00000559401 GRK5P34947 590 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 ENTPD1P49961 510 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 CDH15P55291 814 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 TPTEP56180 551 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 PRSS12P56730 875 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HIST1H3AP68431 136 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SLC3A1Q07837 685 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 BNIP1Q12981 228 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 MALLQ13021 153 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HLXQ14774 488 aaPredicted RBP6.96□□□□□ -1.3
SNX1-207ENST00000559401 CR1LQ2VPA4 569 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 FAM120AOSQ5T036 256 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HIST2H3PS2Q5TEC6 136 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 OR2T2Q6IF00 324 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SLC27A4Q6P1M0 643 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HIST2H3AQ71DI3 136 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SPATC1Q76KD6 591 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 DCXRQ7Z4W1 244 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 TMEM179BQ7Z7N9 219 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 PEG10Q86TG7 708 aaKnown RBP6.96□□□□□ -1.3
SNX1-207ENST00000559401 GLCCI1Q86VQ1 547 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HS3ST5Q8IZT8 346 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 ATG16L2Q8NAA4 619 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 ZNF511Q8NB15 262 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 OR6N2Q8NGY6 317 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 PTP4A1Q93096 173 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 SPTSSAQ969W0 71 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HAVCR1Q96D42 359 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 RAB39BQ96DA2 213 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 PLEKHA8Q96JA3 519 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 GAL3ST1Q99999 423 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 COPS4Q9BT78 406 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 HCAR1Q9BXC0 346 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 CADM1Q9BY67 442 aaKnown RBP6.96□□□□□ -1.3
SNX1-207ENST00000559401 MED20Q9H944 212 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 CENPMQ9NSP4 180 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 TMEM160Q9NX00 188 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 UBAP1Q9NZ09 502 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 CYB5R1Q9UHQ9 305 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 N6AMT1Q9Y5N5 214 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.96□□□□□ -1.31e-15■■■■□ 26.4
SNX1-207ENST00000559401 ZFHX3Q15911 3703 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 JMJD1CQ15652 2540 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 DYSFO75923 2080 aa6.96□□□□□ -1.3
SNX1-207ENST00000559401 TCRBV3S1A0A5B6 114 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ARRDC5A6NEK1 342 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 B4DSR2 109 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 FAM157AC9JC47 383 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 PRR23D1E9PI22 279 aaPredicted RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 M0R135 149 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 DEAF1O75398 565 aaPredicted RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 TIPRLO75663 272 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ATP5HO75947 161 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ACSM4P0C7M7 580 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 PRR23D2P0DMB1 279 aaPredicted RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 RAC2P15153 192 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 SELEP16581 610 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 TNFRSF1AP19438 455 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 PCMT1P22061 227 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 PRKACGP22612 351 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 GGT2P36268 569 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 SRP14P37108 136 aaKnown RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 PRKXP51817 358 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 BLVRAP53004 296 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 SLC25A1P53007 311 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 CDK5R2Q13319 367 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 EIF2B1Q14232 305 aaKnown RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 GINS1Q14691 196 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 SHQ1Q6PI26 577 aaKnown RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 FBXW12Q6X9E4 464 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 Q6ZR03 302 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 MRPL21Q7Z2W9 205 aaKnown RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 ERI1Q8IV48 349 aaKnown RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 ZNF283Q8N7M2 679 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 OR10AD1Q8NGE0 317 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 OR51F2Q8NH61 342 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ITLN1Q8WWA0 313 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ZNRF4Q8WWF5 429 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 SLAMF6Q96DU3 332 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ZNF799Q96GE5 643 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 MAP6Q96JE9 813 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ZNF582Q96NG8 517 aaPredicted RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 INTS14Q96SY0 518 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 RBM4Q9BWF3 364 aaKnown RBP6.95□□□□□ -1.3
SNX1-207ENST00000559401 TEX12Q9BXU0 123 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 OR51V1Q9H2C8 321 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 ZNF665Q9H7R5 613 aa6.95□□□□□ -1.3
SNX1-207ENST00000559401 CMC2Q9NRP2 79 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms