RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ABHD6Q9BV23 337 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 CENPMQ9NSP4 180 aa15.97■□□□□ 0.15
CASC4-209ENST00000559222 ERICH4A6NGS2 130 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 PRR32B1ATL7 298 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 E9PQ18 207 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 TLX2O43763 284 aaPredicted RBP15.96■□□□□ 0.15
CASC4-209ENST00000559222 SLC2A1P11166 492 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 GCH1P30793 250 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 MMP15P51511 669 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 ALDH3A2P51648 485 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 CARTPTQ16568 116 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 SNAI3Q3KNW1 292 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 AADACL4Q5VUY2 407 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 COLCA1Q6ZS62 124 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 RFLNBQ8N5W9 214 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 TMEM163Q8TC26 289 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 C10orf105Q8TEF2 133 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 UBE2FQ969M7 185 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 DCLRE1CQ96SD1 692 aaKnown RBP15.96■□□□□ 0.15
CASC4-209ENST00000559222 C1QTNF5Q9BXJ0 243 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 TTTY10Q9BZA0 68 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 RAB1BQ9H0U4 201 aa15.96■□□□□ 0.15
CASC4-209ENST00000559222 SETD2Q9BYW2 2564 aaPredicted RBP15.95■□□□□ 0.14
CASC4-209ENST00000559222 M0R135 149 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 LILRA1O75019 489 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 OTX1P32242 354 aaPredicted RBP15.95■□□□□ 0.14
CASC4-209ENST00000559222 PRKXP51817 358 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 BLVRAP53004 296 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 SLC35D3Q5M8T2 416 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 ARL9Q6T311 187 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 CLEC2AQ6UVW9 174 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 Q6ZR03 302 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 CMBLQ96DG6 245 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 ZNF799Q96GE5 643 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 C18orf12Q96KH6 178 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 TEAD3Q99594 435 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 COPS4Q9BT78 406 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 TOR3AQ9H497 397 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 MSL2Q9HCI7 577 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 COPS3Q9UNS2 423 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 YLPM1P49750 1951 aaKnown RBP15.95■□□□□ 0.14
CASC4-209ENST00000559222 TANC2Q9HCD6 1990 aa15.95■□□□□ 0.14
CASC4-209ENST00000559222 C17orf100A8MU93 164 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 ZNF878C9JN71 531 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 DAOP14920 347 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 ECH1Q13011 328 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 RCN1Q15293 331 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 OR5AS1Q8N127 324 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 OTOSQ8NHW6 89 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 RNF133Q8WVZ7 376 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 FAM168AQ92567 244 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 STMN2Q93045 179 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 YIPF5Q969M3 257 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 APOBEC3DQ96AK3 386 aaPredicted RBP15.94■□□□□ 0.14
CASC4-209ENST00000559222 TEX12Q9BXU0 123 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 REG4Q9BYZ8 158 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 SLCO1C1Q9NYB5 712 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 DNAJC27Q9NZQ0 273 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 AASSQ9UDR5 926 aa15.94■□□□□ 0.14
CASC4-209ENST00000559222 PURGQ9UJV8 347 aaKnown RBP15.94■□□□□ 0.14
CASC4-209ENST00000559222 H3BSA7 217 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 SPRY3O43610 288 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 TIMM8AO60220 97 aaPredicted RBP15.93■□□□□ 0.14
CASC4-209ENST00000559222 IGHV1-46P01743 117 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 LCATP04180 440 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 INHBBP09529 407 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 COL8A2P25067 703 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 RGS6P49758 472 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 ZNF81P51508 661 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 SELENOVP59797 346 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 CCL8P80075 99 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 KRTAP1-1Q07627 177 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 TSTQ16762 297 aaKnown RBP15.93■□□□□ 0.14
CASC4-209ENST00000559222 OR2T2Q6IF00 324 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 Q71RC1 249 aaPredicted RBP15.93■□□□□ 0.14
CASC4-209ENST00000559222 C10orf67Q8IYJ2 551 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 OR2AE1Q8NHA4 323 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 NEU4Q8WWR8 484 aaPredicted RBP15.93■□□□□ 0.14
CASC4-209ENST00000559222 C9orf16Q9BUW7 83 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 MS4A5Q9H3V2 200 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 ENOPH1Q9UHY7 261 aa15.93■□□□□ 0.14
CASC4-209ENST00000559222 VWC2LB2RUY7 222 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 PSMD9O00233 223 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 APOL3O95236 402 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 ANPEPP15144 967 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 KITLGP21583 273 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 OPRL1P41146 370 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 SLC6A9P48067 706 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 PDLIM4P50479 330 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 TPTEP56180 551 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 GLYATL3Q5SZD4 288 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 LPCAT4Q643R3 524 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 UNQ6126/PRO20091Q6UXV3 157 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 FBXW12Q6X9E4 464 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 MEPCEQ7L2J0 689 aaKnown RBP15.92■□□□□ 0.14
CASC4-209ENST00000559222 SHFQ7M4L6 423 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 SLC16A9Q7RTY1 509 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 FAM81AQ8TBF8 368 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 UBASH3BQ8TF42 649 aa15.92■□□□□ 0.14
CASC4-209ENST00000559222 THEM6Q8WUY1 208 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms