RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 ZNF251Q9BRH9 671 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 JAM3Q9BX67 310 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 TMEM59Q9BXS4 323 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 NXF5Q9H1B4 397 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 SPACA1Q9HBV2 294 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 ZNF160Q9HCG1 818 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 WIF1Q9Y5W5 379 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 TRAV36DV7A0A075B6V5 113 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 OR2T1O43869 369 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 JMJD7P0C870 316 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 FABP4P15090 132 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 ZNF93P35789 620 aaPredicted RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 BTG2P78543 158 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 SRSF5Q13243 272 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 DCAF12L2Q5VW00 463 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 WDR74Q6RFH5 385 aaPredicted RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 USP53Q70EK8 1073 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 PRSS41Q7RTY9 318 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 SFTPA1Q8IWL2 248 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 CA13Q8N1Q1 262 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 OR2L13Q8N349 312 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 HSD17B11Q8NBQ5 300 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 CMBLQ96DG6 245 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 POM121Q96HA1 1249 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 AKR1E2Q96JD6 320 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 KCNJ15Q99712 375 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 C1orf123Q9NWV4 160 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 HAO2Q9NYQ3 351 aa6.45□□□□□ -1.38
USP3-210ENST00000559192 POLR2AP24928 1970 aaKnown RBP6.45□□□□□ -1.38
USP3-210ENST00000559192 PSME4Q14997 1843 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 BRWD3Q6RI45 1802 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TMED7-TICAM2A0A0A6YYA0 188 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 UMAD1C9J7I0 102 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SDCBPO00560 298 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 CTDSPLO15194 276 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 CYB5BO43169 146 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 HLA-DOBP13765 273 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 FUT5Q11128 374 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 CEBPEQ15744 281 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 MLF2Q15773 248 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 C19orf48Q6RUI8 117 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 Q6ZRG5 221 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 HSD17B13Q7Z5P4 300 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 SLC43A2Q8N370 569 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SLC22A24Q8N4F4 322 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 GPR119Q8TDV5 335 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 BADQ92934 168 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SGCZQ96LD1 299 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 UHRF2Q96PU4 802 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 LYRM4Q9HD34 91 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 DKKL1Q9UK85 242 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TMED7Q9Y3B3 224 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 V9GYS6 101 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 CD300LBA8K4G0 201 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 M0R143 59 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SIGLEC6O43699 453 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TRAF3IP2O43734 574 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 F12P00748 615 aaPredicted RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 TTRP02766 147 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SERPINE2P07093 398 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 ALOX5APP20292 161 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 RPL24P83731 157 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 ZNF74Q16587 644 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 FCRL6Q6DN72 434 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 LRRC18Q8N456 261 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 OR6S1Q8NH40 331 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 ADAMTS18Q8TE60 1221 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 USB1Q9BQ65 265 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 CHST6Q9GZX3 395 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 SFXN1Q9H9B4 322 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 RHOFQ9HBH0 211 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 PRR13Q9NZ81 148 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 OPN4Q9UHM6 478 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 RALYQ9UKM9 306 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 TDRD15B5MCY1 1934 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 A0A087X0M5 115 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 A0A1B0GX30 115 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 NUDT21O43809 227 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 LY86O95711 162 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 FCGR2AP12318 317 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 NPBWR1P48145 328 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 CARD18P57730 90 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 DHRS2Q13268 280 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TCTN1Q2MV58 587 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 TRIM61Q5EBN2 209 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 EOGTQ5NDL2 527 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 BAP18Q8IXM2 172 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 C19orf47Q8N9M1 422 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 OR11G2Q8NGC1 345 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 EXTL1Q92935 676 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 MTFP1Q9UDX5 166 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 ST6GALNAC2Q9UJ37 374 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 PCDHGA9Q9Y5G4 932 aaKnown RBP6.44□□□□□ -1.38
USP3-210ENST00000559192 MYLKQ15746 1914 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 FAM74A7A6NL05 159 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 OR5K4A6NMS3 321 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 HMSDA8MTL9 139 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 NUDT19A8MXV4 375 aa6.44□□□□□ -1.38
USP3-210ENST00000559192 MMP7P09237 267 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms