RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TAF13Q15543 124 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 SNAPC1Q16533 368 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 KRTAP27-1Q3LI81 207 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 SLC35D3Q5M8T2 416 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 SPATA46Q5T0L3 261 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 CYB5R2Q6BCY4 276 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 CORO6Q6QEF8 472 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 DRAM2Q6UX65 266 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 FBXW12Q6X9E4 464 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 COLCA1Q6ZS62 124 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 RFPL4BQ6ZWI9 263 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 HS3ST5Q8IZT8 346 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 ZNF511Q8NB15 262 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 OR51L1Q8NGJ5 315 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 OR9Q1Q8NGQ5 310 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 OR6K6Q8NGW6 343 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 HPS1Q92902 700 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 OTULINQ96BN8 352 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 CMBLQ96DG6 245 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 RAB3IPQ96QF0 476 aaPredicted RBP7.24□□□□□ -1.25
TPM1-213ENST00000558400 SMR3AQ99954 134 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 HCAR1Q9BXC0 346 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 C1QTNF5Q9BXJ0 243 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 TPK1Q9H3S4 243 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 FN3KQ9H479 309 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 TOR3AQ9H497 397 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 SLC25A19Q9HC21 320 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 H2AFY2Q9P0M6 372 aaPredicted RBP7.24□□□□□ -1.25
TPM1-213ENST00000558400 PURGQ9UJV8 347 aaKnown RBP7.24□□□□□ -1.25
TPM1-213ENST00000558400 ATRQ13535 2644 aa7.24□□□□□ -1.25
TPM1-213ENST00000558400 MAP1AP78559 2803 aaPredicted RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 A0A096LNT2 108 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 TVP23AA6NH52 213 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 M0R135 149 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 GPR37O15354 613 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 HPXP02790 462 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 LCATP04180 440 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 GYPBP06028 91 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 CD55P08174 381 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 DBHP09172 617 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 SPARCP09486 303 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 TACSTD2P09758 323 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 ACSM4P0C7M7 580 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 TNFRSF1AP19438 455 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 COL8A2P25067 703 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 GSTT1P30711 240 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 OTX1P32242 354 aaPredicted RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 MPV17P39210 176 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 CHN2P52757 468 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 GRB2P62993 217 aaKnown RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 CCL8P80075 99 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 CDK5R2Q13319 367 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 GGTLC2Q14390 218 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 PTGES3Q15185 160 aaKnown RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 RSPO1Q2MKA7 263 aaPredicted RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 TMEM249Q2WGJ8 235 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 HFEQ30201 348 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 ALKBH6Q3KRA9 238 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 LINC01590Q5TEZ4 76 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 OTPQ5XKR4 325 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 KDM4DQ6B0I6 523 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 PLBD1Q6P4A8 553 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 CFAP77Q6ZQR2 320 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 Q71RC1 249 aaPredicted RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 DCXRQ7Z4W1 244 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 AMIGO2Q86SJ2 522 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 PEG10Q86TG7 708 aaKnown RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 CPOQ8IVL8 374 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 LINC00346Q8IVM7 164 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 IQCF1Q8N6M8 205 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 MAPK1IP1LQ8NDC0 245 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 OR13G1Q8NGZ3 307 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 LRTOMTQ8WZ04 291 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 SLC7A6Q92536 515 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 ELMOD3Q96FG2 381 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 ZNF799Q96GE5 643 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 TIMD4Q96H15 378 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 MAP6Q96JE9 813 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 ZNF582Q96NG8 517 aaPredicted RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 INTS14Q96SY0 518 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 KCNJ15Q99712 375 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 BPESC1Q9GZL8 116 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 SLC22A4Q9H015 551 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 OR51V1Q9H2C8 321 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 WDR76Q9H967 626 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 MARCH7Q9H992 704 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 SAP30LQ9HAJ7 183 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 KRT84Q9NSB2 600 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 CENPMQ9NSP4 180 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 DDX28Q9NUL7 540 aaKnown RBP7.23□□□□□ -1.25
TPM1-213ENST00000558400 TVP23BQ9NYZ1 205 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 COMMD3-BMI1R4GMX3 469 aa7.23□□□□□ -1.25
TPM1-213ENST00000558400 IGHV1-69-2A0A0G2JMI3 117 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 ERICH4A6NGS2 130 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 FAM183AA6NL82 134 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 ZNF878C9JN71 531 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 IFNL4K9M1U5 179 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 SPRY3O43610 288 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 IGHV1-46P01743 117 aa7.22□□□□□ -1.25
TPM1-213ENST00000558400 CLUP10909 449 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms