RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TMEM37Q8WXS4 190 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 LHX4Q969G2 390 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TREM2Q9NZC2 230 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 U3KQ87 197 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 ECI1P42126 302 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 RPL29P47914 159 aaKnown RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 CEBPEQ15744 281 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SYT14P1Q58G82 188 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TM4SF18Q96CE8 201 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 WDR89Q96FK6 387 aaPredicted RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 SMOC1Q9H4F8 434 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 TAAR5O14804 337 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 OLFM2O95897 454 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SOD1P00441 154 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SLC25A4P12235 298 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 SOX18P35713 384 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 ZNF133P52736 654 aaPredicted RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 PPIAP62937 165 aaKnown RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 Q6ZSR9 355 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 NKAIN4Q8IVV8 208 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 CBARPQ8N350 705 aaPredicted RBP12.73□□□□□ -0.37
SPG11-210ENST00000558319 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 NAT6Q93015 286 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 ORAI1Q96D31 301 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 FER1L6-AS2Q96M78 137 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 Q96M85 177 aa12.73□□□□□ -0.37
SPG11-210ENST00000558319 BTBD17A6NE02 478 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 TMEM221A6NGB7 291 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 OR4E1P0C645 316 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 CD37P11049 281 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ARRB2P32121 409 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 LCORQ96JN0 433 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 P2RY12Q9H244 342 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 UBQLN3Q9H347 655 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 LRP3O75074 770 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 PIAS2O75928 621 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ONECUT2O95948 504 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 LDLRAD1Q5T700 205 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 OTUD1Q5VV17 481 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 ETFBKMTQ8IXQ9 262 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ADIPOR1Q96A54 375 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 RBM14Q96PK6 669 aaKnown RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 CTSFQ9UBX1 484 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 OR5V1Q9UGF6 321 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 GALR3O60755 368 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 LY86O95711 162 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 HRH1P35367 487 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 OR5I1Q13606 314 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 FUNDC1Q8IVP5 155 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 GPR32P1Q8NGA4 272 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ACTR3CQ9C0K3 210 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 ING1Q9UK53 422 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 MED19A0JLT2 244 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 TAPBPO15533 448 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 GLCEO94923 617 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 CD63P08962 238 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 APH1AQ96BI3 265 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 A4GALTQ9NPC4 353 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 XRCC2O43543 280 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 TBPP20226 339 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 OPRM1P35372 400 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ISL1P61371 349 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 ZXDAP98168 799 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 GGNBP1Q5YKI7 109 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 C6orf15Q6UXA7 325 aaPredicted RBP12.72□□□□□ -0.37
SPG11-210ENST00000558319 ROBO4Q8WZ75 1007 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 TBC1D29Q9UFV1 150 aa12.72□□□□□ -0.37
SPG11-210ENST00000558319 A0A1W2PPH5 198 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 CT45A10P0DMU9 189 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 SLC35A1P78382 337 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 ZNF85Q03923 595 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 COL13A1Q5TAT6 717 aaPredicted RBP12.71□□□□□ -0.37
SPG11-210ENST00000558319 NKAIN3Q8N8D7 197 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 MARCH1Q8TCQ1 289 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 SLC39A7Q92504 469 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 RAB18Q9NP72 206 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 A0A1W2PRD5 423 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 A0A1W2PRF3 423 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 A0A1W2PRM7 423 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 NUDT19A8MXV4 375 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 FOXE1O00358 373 aaPredicted RBP12.71□□□□□ -0.37
SPG11-210ENST00000558319 MMP7P09237 267 aaPredicted RBP12.71□□□□□ -0.37
SPG11-210ENST00000558319 ADRA1AP35348 466 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 SUOXP51687 545 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 FABP5Q01469 135 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 SEH1LQ96EE3 360 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 C1QTNF3Q9BXJ4 246 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 SEMA6CQ9H3T2 930 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 STRAPQ9Y3F4 350 aaKnown RBP12.71□□□□□ -0.37
SPG11-210ENST00000558319 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
SPG11-210ENST00000558319 CD3DP04234 171 aa12.71□□□□□ -0.37
SPG11-210ENST00000558319 ACSM4P0C7M7 580 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms