RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 GABRG1Q8N1C3 465 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 NUP37Q8NFH4 326 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 OR4M2Q8NGB6 313 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 OR5L2Q8NGL0 311 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 OR52J3Q8NH60 311 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 FNDC9Q8TBE3 224 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 MCHR2Q969V1 340 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 TM4SF19Q96DZ7 209 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 RILPQ96NA2 401 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 POTEKPQ9BYX7 375 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 C10orf88Q9H8K7 445 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 MED20Q9H944 212 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 RDH8Q9NYR8 311 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 TREM2Q9NZC2 230 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 MRPS33Q9Y291 106 aaKnown RBP4.53□□□□□ -1.68
RTF1-204ENST00000558117 TMED7Q9Y3B3 224 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 SLC22A7Q9Y694 548 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 HEATR5BQ9P2D3 2071 aa4.53□□□□□ -1.68
RTF1-204ENST00000558117 LOC285095A0A1B0GVY8 99 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 STX7O15400 261 aaKnown RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 MFSD11O43934 449 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 AQP8O94778 261 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 SYNGR4O95473 234 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 PAHP00439 452 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 RPN2P04844 631 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 CRYBA1P05813 215 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 IL32P24001 234 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 SFTPDP35247 375 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 CHI3L1P36222 383 aaPredicted RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 RGS4P49798 205 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 MS4A2Q01362 244 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 PRDX1Q06830 199 aaKnown RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 BCL2A1Q16548 175 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 HADHQ16836 314 aaKnown RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 MOGAT2Q3SYC2 334 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 AGKQ53H12 422 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 KLF17Q5JT82 389 aaPredicted RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 CBLN3Q6UW01 205 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 GLT6D1Q7Z4J2 308 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 CARM1Q86X55 608 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 DND1Q8IYX4 353 aaKnown RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 SLC35F6Q8N357 371 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 Q8NBF4 154 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 AQP11Q8NBQ7 271 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 MORN4Q8NDC4 146 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 ADAMTS16Q8TE57 1224 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 PEX13Q92968 403 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 RAD51AP1Q96B01 352 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 RASD2Q96D21 266 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 CNRIP1Q96F85 164 aaPredicted RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 MCEEQ96PE7 176 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 RAB40CQ96S21 281 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 DCTN5Q9BTE1 182 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 PKIBQ9C010 78 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 EHD1Q9H4M9 534 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 PLEK2Q9NYT0 353 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 TAS2R16Q9NYV7 291 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 HACD3Q9P035 362 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 ELF5Q9UKW6 265 aaPredicted RBP4.52□□□□□ -1.69
RTF1-204ENST00000558117 NUP50Q9UKX7 468 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 ZNF175Q9Y473 711 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 HYOU1Q9Y4L1 999 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 MMACHCQ9Y4U1 282 aa4.52□□□□□ -1.69
RTF1-204ENST00000558117 TET2Q6N021 2002 aaPredicted RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 FAT2Q9NYQ8 4349 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 TRBV5-4A0A0C4DH59 114 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 HELTA6NFD8 242 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 NPIPB9F8W1W9 429 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 KCNK1O00180 336 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 TRAF3IP2O43734 574 aaPredicted RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 IDH3BO43837 385 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SS18L1O75177 396 aaPredicted RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 MT-ND1P03886 318 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 H2AFZP0C0S5 128 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 MIPP30301 263 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SRD5A2P31213 254 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 PTGFRP43088 359 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 RPP38P78345 283 aaKnown RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 CBX1P83916 185 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SRSF9Q13242 221 aaKnown RBP eCLIP4.51□□□□□ -1.69
RTF1-204ENST00000558117 NIPAL3Q6P499 406 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 TRIM40Q6P9F5 258 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 PAQR6Q6TCH4 344 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 FRRS1Q6ZNA5 592 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 H2AFVQ71UI9 128 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 CHMP1BQ7LBR1 199 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 NANOGNBQ7Z5D8 188 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SNX20Q7Z614 316 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 P2RY8Q86VZ1 359 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SERPINA9Q86WD7 417 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 DRAXINQ8NBI3 349 aaPredicted RBP4.51□□□□□ -1.69
RTF1-204ENST00000558117 BBOF1Q8ND07 529 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 TRPV3Q8NET8 790 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 OR4K2Q8NGD2 314 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 NUBPLQ8TB37 319 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SPPL2AQ8TCT8 520 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 BLOC1S5Q8TDH9 187 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 RAB39BQ96DA2 213 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 SLC30A2Q9BRI3 323 aa4.51□□□□□ -1.69
RTF1-204ENST00000558117 HOXD1Q9GZZ0 328 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms