RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 KCTD18Q6PI47 426 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF679Q8IYX0 411 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 SPTSSAQ969W0 71 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 C14orf79Q96F83 325 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 MROQ9BYG7 248 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 FGF20Q9NP95 211 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-213ENST00000557644 BRD7Q9NPI1 651 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 LRRC42Q9Y546 428 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 N6AMT1Q9Y5N5 214 aa13.18□□□□□ -0.3
NEDD1-213ENST00000557644 PHYHO14832 338 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 SMPD2O60906 423 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 C21orf33P30042 268 aaPredicted RBP13.17□□□□□ -0.3
NEDD1-213ENST00000557644 GRB2P62993 217 aaKnown RBP13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ACTC1P68032 377 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ACTA1P68133 377 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 EGR3Q06889 387 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 MED21Q13503 144 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF672Q499Z4 452 aaPredicted RBP13.17□□□□□ -0.3
NEDD1-213ENST00000557644 SPATA46Q5T0L3 261 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF684Q5T5D7 378 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 RHOUQ7L0Q8 258 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ABHD4Q8TB40 342 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 FKBP14Q9NWM8 211 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 PCDHGB1Q9Y5G3 927 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 SPG11Q96JI7 2443 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 EFCAB10A6NFE3 127 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 CX3CR1P49238 355 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 TPTEP56180 551 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 MSMPQ1L6U9 139 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 TP53I3Q53FA7 332 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF283Q8N7M2 679 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 POFUT1Q9H488 388 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 CA10Q9NS85 328 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 ERVK13-1Q9NX77 482 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 CISD1Q9NZ45 108 aaKnown RBP13.17□□□□□ -0.3
NEDD1-213ENST00000557644 CNOT2Q9NZN8 540 aaKnown RBP13.17□□□□□ -0.3
NEDD1-213ENST00000557644 EIF3KQ9UBQ5 218 aaKnown RBP13.17□□□□□ -0.3
NEDD1-213ENST00000557644 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 FZR1Q9UM11 496 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 APCP25054 2843 aa13.17□□□□□ -0.3
NEDD1-213ENST00000557644 GOSR1O95249 250 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 LIMS3P0CW19 117 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 LIMS4P0CW20 117 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 PIPP12273 146 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-213ENST00000557644 CRHBPP24387 322 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 DCKP27707 260 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 PCSK6P29122 969 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 THBS4P35443 961 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 ETV1P50549 477 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 SNAI3Q3KNW1 292 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 DOK1Q99704 481 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 ALG8Q9BVK2 526 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 GNG8Q9UK08 70 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 DIMT1Q9UNQ2 313 aaKnown RBP13.16□□□□□ -0.3
NEDD1-213ENST00000557644 STARD10Q9Y365 291 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 CSMD1Q96PZ7 3565 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 ICMTO60725 284 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 LCATP04180 440 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 LCKP06239 509 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 CCDC159P0C7I6 412 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 OR12D2P58182 307 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF121P58317 390 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-213ENST00000557644 GALEQ14376 348 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 DEGS2Q6QHC5 323 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 NUP37Q8NFH4 326 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 OR1J1Q8NGS3 322 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 TMEM171Q8WVE6 324 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 C1QTNF5Q9BXJ0 243 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 PLEKHF2Q9H8W4 249 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 ISG20L2Q9H9L3 353 aaKnown RBP13.16□□□□□ -0.3
NEDD1-213ENST00000557644 UBTD1Q9HAC8 227 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 ACOXLQ9NUZ1 547 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 TBCCD1Q9NVR7 557 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 SCN3BQ9NY72 215 aa13.16□□□□□ -0.3
NEDD1-213ENST00000557644 RPP14O95059 124 aaKnown RBP13.15□□□□□ -0.3
NEDD1-213ENST00000557644 PNPP00491 289 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 KRT8P05787 483 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 SSTR2P30874 369 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 RAD52P43351 418 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 RIDAP52758 137 aaKnown RBP13.15□□□□□ -0.3
NEDD1-213ENST00000557644 CSNK2BP67870 215 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 SLC35A2P78381 396 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 CDONQ4KMG0 1287 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 DRAM2Q6UX65 266 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 COLCA1Q6ZS62 124 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 PRSS45Q7RTY3 260 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 YIPF7Q8N8F6 280 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 NRGNQ92686 78 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 DCLRE1CQ96SD1 692 aaKnown RBP13.15□□□□□ -0.3
NEDD1-213ENST00000557644 OR2J1Q9GZK6 312 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 ZNF319Q9P2F9 582 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 SPEF1Q9Y4P9 236 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 POLQO75417 2590 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 IRGMA1A4Y4 181 aa13.15□□□□□ -0.3
NEDD1-213ENST00000557644 METTL15A6NJ78 407 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms