RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 RNF165Q6ZSG1 346 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 RANBP3LQ86VV4 465 aaPredicted RBP7.48□□□□□ -1.21
NEDD1-211ENST00000557454 DYNAPQ8N1N2 210 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 FAM216BQ8N7L0 139 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 SPC24Q8NBT2 197 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 ZNF583Q96ND8 569 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 PAFAH2Q99487 392 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 CCL13Q99616 98 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 SNX12Q9UMY4 172 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 TIMM10BQ9Y5J6 103 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 DNAJC15Q9Y5T4 150 aa7.48□□□□□ -1.21
NEDD1-211ENST00000557454 DNAH2Q9P225 4427 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 SEC14L6B5MCN3 397 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 M0R1W7 72 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 LDLRAD4O15165 306 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 SNRNP70P08621 437 aaKnown RBP7.47□□□□□ -1.21
NEDD1-211ENST00000557454 ETFAP13804 333 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 CD200P41217 278 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 SERPINB9P50453 376 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 ZNF133P52736 654 aaPredicted RBP7.47□□□□□ -1.21
NEDD1-211ENST00000557454 PLTPP55058 493 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 FMODQ06828 376 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 IKZF1Q13422 519 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 RPS26P11Q5JNZ5 115 aaPredicted RBP7.47□□□□□ -1.21
NEDD1-211ENST00000557454 CFAP157Q5JU67 520 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 FBXW12Q6X9E4 464 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 OR2W3Q7Z3T1 314 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 LHFPL4Q7Z7J7 247 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 RPS4Y2Q8TD47 263 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 H1FXQ92522 213 aaKnown RBP7.47□□□□□ -1.21
NEDD1-211ENST00000557454 MRPL13Q9BYD1 178 aaKnown RBP7.47□□□□□ -1.21
NEDD1-211ENST00000557454 ABCB10Q9NRK6 738 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 TMEM100Q9NV29 134 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 TAS2R5Q9NYW4 299 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 PITPNC1Q9UKF7 332 aa7.47□□□□□ -1.21
NEDD1-211ENST00000557454 PRPF19Q9UMS4 504 aaKnown RBP7.47□□□□□ -1.21
NEDD1-211ENST00000557454 A0A1B0GWJ7 208 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 IQCF6A8MYZ5 107 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 TMEM233B4DJY2 109 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 DOK2O60496 412 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 DEDDO75618 318 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 CHEK2O96017 543 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 CST2P09228 141 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 SELLP14151 372 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 CEBPDP49716 269 aaPredicted RBP7.46□□□□□ -1.22
NEDD1-211ENST00000557454 ECH1Q13011 328 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 SELPLGQ14242 412 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 WDR38Q5JTN6 314 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 BEND6Q5SZJ8 279 aaPredicted RBP7.46□□□□□ -1.22
NEDD1-211ENST00000557454 FAM27BQ5VT28 67 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 HHATQ5VTY9 493 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 KANK2Q63ZY3 851 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 C16orf89Q6UX73 402 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 GCSAMQ8N6F7 178 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 FNDC5Q8NAU1 212 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 KLHL30-AS1Q8NEE0 82 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 IL17DQ8TAD2 202 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 TWIST2Q8WVJ9 160 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 DNAJA4Q8WW22 397 aaPredicted RBP7.46□□□□□ -1.22
NEDD1-211ENST00000557454 SLC7A6Q92536 515 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 PPP3R2Q96LZ3 170 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 COG8Q96MW5 612 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 SEPHS2Q99611 448 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 CPPED1Q9BRF8 314 aaPredicted RBP7.46□□□□□ -1.22
NEDD1-211ENST00000557454 ERP44Q9BS26 406 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 WDR76Q9H967 626 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 SORL1Q92673 2214 aa7.46□□□□□ -1.22
NEDD1-211ENST00000557454 A0A1W2PQ09 198 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 MCIDASD6RGH6 385 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 G3V2L1 256 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 TRMUO75648 421 aaKnown RBP7.45□□□□□ -1.22
NEDD1-211ENST00000557454 MT-ATP6P00846 226 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 BCHEP06276 602 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 LPLP06858 475 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 MYL2P10916 166 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 ECHS1P30084 290 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 PCBD1P61457 104 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 BLMHQ13867 455 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 ENDOGQ14249 297 aaKnown RBP7.45□□□□□ -1.22
NEDD1-211ENST00000557454 TEX36Q5VZQ5 186 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 ZYG11AQ6WRX3 759 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 ZNF826PQ6ZT77 177 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 SLC35F6Q8N357 371 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 LSMEM1Q8N8F7 131 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 OR5M8Q8NGP6 311 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 RAX2Q96IS3 184 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 ARMC7Q9H6L4 198 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 C1orf123Q9NWV4 160 aa7.45□□□□□ -1.22
NEDD1-211ENST00000557454 PRSS51A0A1B0GVH4 220 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 H0YAE9 185 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 CCL24O00175 119 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 ACOT8O14734 319 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 NDUFB3O43676 98 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 GHRHP01286 108 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 SNRPAP09012 282 aaKnown RBP7.44□□□□□ -1.22
NEDD1-211ENST00000557454 COX5BP10606 129 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 COX7A1P24310 79 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 PRKAR1BP31321 381 aa7.44□□□□□ -1.22
NEDD1-211ENST00000557454 PHBP35232 272 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms