RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 FAM122BQ7Z309 247 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 NANOGNBQ7Z5D8 188 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 GPAT4Q86UL3 456 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 C10orf53Q8N6V4 93 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF433Q8N7K0 673 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-230ENST00000557427 NPEPL1Q8NDH3 523 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 SDR9C7Q8NEX9 313 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 OR6S1Q8NH40 331 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 MOSPD2Q8NHP6 518 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 STK35Q8TDR2 534 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 ADAD1Q96M93 576 aaKnown RBP10.86□□□□□ -0.67
SHMT2-230ENST00000557427 KCTD7Q96MP8 289 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 MOGAT1Q96PD6 335 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 KATNB1Q9BVA0 655 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 NUAK2Q9H093 628 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 PARPBPQ9NWS1 579 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 BABAM2Q9NXR7 383 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 UPB1Q9UBR1 384 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF281Q9Y2X9 895 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 NBEAL2Q6ZNJ1 2754 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 IQCMA0A1B0GVH7 501 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 A0A1W2PR80 420 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 TMEM89A2RUT3 159 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 NPIPB7O75200 414 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 RAD51DO75771 328 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 SULT1C4O75897 302 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 LY6HO94772 140 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 MT-ND5P03915 603 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 HLA-DPB1P04440 258 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 HIST1H2ABP04908 130 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 OR2T7P0C7T2 308 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 CLUP10909 449 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 SDHAP31040 664 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 AQP2P41181 271 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 RPS5P46782 204 aaKnown RBP10.85□□□□□ -0.67
SHMT2-230ENST00000557427 SLC16A1P53985 500 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 FOXG1P55316 489 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-230ENST00000557427 ERVK-25P63136 954 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 FABP5Q01469 135 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF85Q03923 595 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 HSF2Q03933 536 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 SLC17A1Q14916 467 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 TRAM1Q15629 374 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 GPR139Q6DWJ6 353 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 B3GLCTQ6Y288 498 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 HIST3H2AQ7L7L0 130 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 KLBQ86Z14 1044 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 KDM8Q8N371 416 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 OR10H4Q8NGA5 316 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 OR9K2Q8NGE7 335 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 OR2T27Q8NH04 317 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 CHPT1Q8WUD6 406 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 HIST1H2ACQ93077 130 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 TAAR8Q969N4 342 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 SLC25A46Q96AG3 418 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 MUCL1Q96DR8 90 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 KTI12Q96EK9 354 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-230ENST00000557427 CNN2Q99439 309 aaKnown RBP10.85□□□□□ -0.67
SHMT2-230ENST00000557427 C6orf62Q9GZU0 229 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-230ENST00000557427 NGBQ9NPG2 151 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 TRIM36Q9NQ86 728 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 FLVCR1Q9Y5Y0 555 aa10.85□□□□□ -0.67
SHMT2-230ENST00000557427 PNMA8CA0A1B0GUJ8 204 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 AQP7P3A6NL99 342 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 BLOC1S5-TXNDC5H3BN57 136 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 GLCEO94923 617 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 CDRT1O95170 752 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 AHSA1O95433 338 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 TGFAP01135 160 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 SPI1P17947 270 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 CELP19835 753 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 CTXN1P60606 82 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 ACTA2P62736 377 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 ACTG2P63267 376 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 RPL18Q07020 188 aaKnown RBP10.84□□□□□ -0.67
SHMT2-230ENST00000557427 PPA1Q15181 289 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 RGS21Q2M5E4 152 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 TSPO2Q5TGU0 170 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 AGAP6Q5VW22 663 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 C22orf42Q6IC83 251 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 AAED1Q7RTV5 226 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 JAZF1Q86VZ6 243 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 EGFL6Q8IUX8 553 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 SYS1Q8N2H4 156 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 ZFP41Q8N8Y5 198 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 ZIC4Q8N9L1 334 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 TMEM203Q969S6 136 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 RASD2Q96D21 266 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
SHMT2-230ENST00000557427 Q96M85 177 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF385AQ96PM9 386 aaKnown RBP10.84□□□□□ -0.67
SHMT2-230ENST00000557427 SNX18Q96RF0 628 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 NMNAT3Q96T66 252 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 PTDSS2Q9BVG9 487 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 C1QTNF6Q9BXI9 259 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 BARHL1Q9BZE3 327 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 ISG20L2Q9H9L3 353 aaKnown RBP10.84□□□□□ -0.67
SHMT2-230ENST00000557427 SMURF1Q9HCE7 757 aa10.84□□□□□ -0.67
SHMT2-230ENST00000557427 MOKQ9UQ07 419 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms