RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.46□□□□□ -2.02
VRK1-207ENST00000557352 C1orf109Q9NX04 203 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SLC23A2Q9UGH3 650 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 SLC22A14Q9Y267 594 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 ASF1AQ9Y294 204 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 NDUFAF1Q9Y375 327 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 PCYT1BQ9Y5K3 369 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 VCANP13611 3396 aa2.46□□□□□ -2.02
VRK1-207ENST00000557352 EP300Q09472 2414 aaPredicted RBP2.46□□□□□ -2.02
VRK1-207ENST00000557352 GPR179Q6PRD1 2367 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SDK2Q58EX2 2172 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 E7EQ34 232 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 NPIPA2E9PIF3 369 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 FXYD1O00168 92 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SLC31A1O15431 190 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 GYG2O15488 501 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 FKBP6O75344 327 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 PDYNP01213 254 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 TNFP01375 233 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 LINC00032P0C843 101 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ZCCHC18P0CG32 403 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 IL1RNP18510 177 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SDC1P18827 310 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 NCF2P19878 526 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 GCKP35557 465 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 BDKRB1P46663 353 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CXCL12P48061 93 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CCR8P51685 355 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 POLR2JP52435 117 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 RAG2P55895 527 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ACTR3P61158 418 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 RPS15AP62244 130 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 ELF3P78545 371 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 MYBPC1Q00872 1141 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ZNF763Q0D2J5 394 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 BNIP2Q12982 314 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 DOC2AQ14183 400 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 FZD2Q14332 565 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ELOCQ15369 112 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ZIC1Q15915 447 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 IMPG1Q17R60 797 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SLC5A12Q1EHB4 618 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 C18orf21Q32NC0 220 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 CCSMST1Q4G0I0 132 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 PIGGQ5H8A4 983 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SAMD4BQ5PRF9 694 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 NIPAL1Q6NVV3 410 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ZFP1Q6P2D0 407 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ATRAIDQ6UW56 229 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 TMIGD1Q6UXZ0 262 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 MBOAT1Q6ZNC8 495 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 Q6ZSR6 202 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 RPS27LQ71UM5 84 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 Q7L0L9 218 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 PAGE2Q7Z2X7 111 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 GKN2Q86XP6 184 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 FUNDC1Q8IVP5 155 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 RIMKLAQ8IXN7 391 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 TBC1D19Q8N5T2 526 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ARL10Q8N8L6 244 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SNX31Q8N9S9 440 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 FNDC5Q8NAU1 212 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 OR2L3Q8NG85 312 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 OR6C4Q8NGE1 309 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 OR8J3Q8NGG0 315 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 OR5AR1Q8NGP9 310 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 OR2A1Q8NGT9 310 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 KIR2DL5BQ8NHK3 375 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 FNDC8Q8TC99 324 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SKA2Q8WVK7 121 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 SLC13A3Q8WWT9 602 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SELENOMQ8WWX9 145 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 LHX4Q969G2 390 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 MARC2Q969Z3 335 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 MCUR1Q96AQ8 359 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ASB9Q96DX5 294 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 DUS3LQ96G46 650 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 PDXPQ96GD0 296 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 C12orf66Q96MD2 445 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CCDC115Q96NT0 180 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CATSPER2Q96P56 530 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 KCNA7Q96RP8 456 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SH3GL1Q99961 368 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SPXQ9BT56 116 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 NDUFAF3Q9BU61 184 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 MS4A8Q9BY19 250 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ZNF717Q9BY31 904 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 ROGDIQ9GZN7 287 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 ELOVL6Q9H5J4 265 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 WDR55Q9H6Y2 383 aaPredicted RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 PATZ1Q9HBE1 687 aaKnown RBP2.45□□□□□ -2.02
VRK1-207ENST00000557352 LRTM1Q9HBL6 345 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 SLC40A1Q9NP59 571 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 GID8Q9NWU2 228 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 TAS2R7Q9NYW3 318 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 AHSPQ9NZD4 102 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 VPS29Q9UBQ0 182 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 MIOXQ9UGB7 285 aa2.45□□□□□ -2.02
VRK1-207ENST00000557352 CD300AQ9UGN4 299 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms