RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ESCO2Q56NI9 601 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 ZNF620Q6ZNG0 422 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 CFAP77Q6ZQR2 320 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 CPLX4Q7Z7G2 160 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 ZBTB46Q86UZ6 589 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 BHLHE23Q8NDY6 225 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 DEFB108BQ8NET1 73 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 SDR9C7Q8NEX9 313 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 OR4K13Q8NH42 304 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 GCDHQ92947 438 aaPredicted RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 MEGF10Q96KG7 1140 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 ATF6BQ99941 703 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 MRI1Q9BV20 369 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 HCAR1Q9BXC0 346 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 SRA1Q9HD15 236 aaKnown RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 OR5V1Q9UGF6 321 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 TMCC3Q9ULS5 477 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 LRCH1Q9Y2L9 728 aa11.92□□□□□ -0.5
SNX6-210ENST00000557341 POLR3KQ9Y2Y1 108 aaPredicted RBP11.92□□□□□ -0.5
SNX6-210ENST00000557341 CEACAM18A8MTB9 384 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 MLNRO43193 412 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 ATP8B1O43520 1251 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 SELEP16581 610 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 ZNF12P17014 697 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 GSSP48637 474 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 ECH1Q13011 328 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 ZNF154Q13106 437 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 SLC18B1Q6NT16 456 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 COLCA1Q6ZS62 124 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 LINC00346Q8IVM7 164 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 OR52L1Q8NGH7 329 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 OR2AJ1Q8NGZ0 328 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 ZNF420Q8TAQ5 688 aaPredicted RBP11.91□□□□□ -0.5
SNX6-210ENST00000557341 C22orf15Q8WYQ4 148 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 PITX2Q99697 317 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 SLC30A2Q9BRI3 323 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 CDADC1Q9BWV3 514 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 FN3KQ9H479 309 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 WDR76Q9H967 626 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 NTN4Q9HB63 628 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 IL1RAPQ9NPH3 570 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 MMP26Q9NRE1 261 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 NDE1Q9NXR1 346 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 CD300AQ9UGN4 299 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 INSIG2Q9Y5U4 225 aa11.91□□□□□ -0.5
SNX6-210ENST00000557341 TMEM89A2RUT3 159 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 LRRC30A6NM36 301 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 TRAPPC2LH3BP13 241 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 IDH3BO43837 385 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 ACSM4P0C7M7 580 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 RPS2P15880 293 aaKnown RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 MSX2P35548 267 aaPredicted RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 TRAP1Q12931 704 aaKnown RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 KRTAP27-1Q3LI81 207 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 RPL13AP3Q6NVV1 102 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 C16orf89Q6UX73 402 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 ZDHHC21Q8IVQ6 265 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 C1orf87Q8N0U7 546 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 GNPDA2Q8TDQ7 276 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 DVL3Q92997 716 aaPredicted RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 ZMYND19Q96E35 227 aaPredicted RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 SSBP3Q9BWW4 388 aaPredicted RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 ESM1Q9NQ30 184 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 DDX28Q9NUL7 540 aaKnown RBP11.9□□□□□ -0.5
SNX6-210ENST00000557341 CYB5R1Q9UHQ9 305 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 TAGLN3Q9UI15 199 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 KCNG2Q9UJ96 466 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 NUP50Q9UKX7 468 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 AUP1Q9Y679 476 aa11.9□□□□□ -0.5
SNX6-210ENST00000557341 OR6C68A6NDL8 312 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 F5H5K5 113 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 F5H5P2 479 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 H0YL77 283 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 CYB5R3P00387 301 aaPredicted RBP11.89□□□□□ -0.51
SNX6-210ENST00000557341 CPT2P23786 658 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 GGT2P36268 569 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 MXRA7P84157 204 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNX6-210ENST00000557341 DBPQ10586 325 aaPredicted RBP11.89□□□□□ -0.51
SNX6-210ENST00000557341 MALLQ13021 153 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 ZNF181Q2M3W8 571 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 SPATS1Q496A3 300 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 PGBD2Q6P3X8 592 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 RBMS3Q6XE24 437 aaKnown RBP11.89□□□□□ -0.51
SNX6-210ENST00000557341 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 C3orf56Q8N813 242 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 ZDHHC22Q8N966 263 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 OR52E2Q8NGJ4 325 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 CDRT15Q96T59 188 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 PNRC2Q9NPJ4 139 aaKnown RBP11.89□□□□□ -0.51
SNX6-210ENST00000557341 TMEM100Q9NV29 134 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 PPIAL4AQ9Y536 164 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 CDH10Q9Y6N8 788 aa11.89□□□□□ -0.51
SNX6-210ENST00000557341 A0A1B0GWJ7 208 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 DCTN3O75935 186 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 KRT36O76013 467 aa11.88□□□□□ -0.51
SNX6-210ENST00000557341 LCATP04180 440 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms