RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 ZNF665Q9H7R5 613 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 SP140LQ9H930 580 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 CXorf21Q9HAI6 301 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 CA10Q9NS85 328 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 TREX1Q9NSU2 369 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 KLK11Q9UBX7 282 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 NUP50Q9UKX7 468 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 ZNF490Q9ULM2 529 aaPredicted RBP2.98□□□□□ -1.93
CHD8-212ENST00000557329 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.98□□□□□ -1.93
CHD8-212ENST00000557329 TFR2Q9UP52 801 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 ZNF780BQ9Y6R6 833 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 CMYA5Q8N3K9 4069 aa2.98□□□□□ -1.93
CHD8-212ENST00000557329 A0A1B0GUS0 222 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 MDFIC2A0A1B0GVS7 189 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CLPSL1A2RUU4 121 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 RBMY1BA6NDE4 496 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 RBMY1EA6NEQ0 496 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 OR6C65A6NJZ3 312 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 AP3B1O00203 1094 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 TNFSF12O43508 249 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 SHOX2O60902 331 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 MRPL33O75394 65 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 SAP30O75446 220 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 ANGPTL1O95841 491 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 KLK1P06870 262 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 TPM1P09493 284 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 RBMY1DP0C7P1 496 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 SELEP16581 610 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 ZNF17P17021 662 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 NPR2P20594 1047 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 DRD5P21918 477 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 TIA1P31483 386 aaKnown RBP eCLIP2.97□□□□□ -1.93
CHD8-212ENST00000557329 STIP1P31948 543 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 MAGEA1P43355 309 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 PPICP45877 212 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CRYBA2P53672 197 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CDKN2DP55273 166 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 PRPS1P60891 318 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 UBE2NP61088 152 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 TPM4P67936 248 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 SARNPP82979 210 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 C17orf67Q0P5P2 114 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CHIT1Q13231 466 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 ZNF273Q14593 569 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 GANABQ14697 944 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 LTB4RQ15722 352 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 STX1AQ16623 288 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 RSBN1Q5VWQ0 802 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 ANKRD22Q5VYY1 191 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 OR52E8Q6IFG1 317 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 MED27Q6P2C8 311 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 BAIAP2L2Q6UXY1 529 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 SSX8Q7RTT4 187 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 LUZP1Q86V48 1076 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 RIBC1Q8N443 379 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 ZNF433Q8N7K0 673 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 BEST4Q8NFU0 473 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 OR52E4Q8NGH9 312 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 KIF18AQ8NI77 898 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 ST7LQ8TDW4 575 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CHPT1Q8WUD6 406 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CKAP2Q8WWK9 683 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 RDH5Q92781 318 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 UBE2E3Q969T4 207 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CPNE4Q96A23 557 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 RAB39BQ96DA2 213 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CNRIP1Q96F85 164 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 CHMP6Q96FZ7 201 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 PDLIM5Q96HC4 596 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 SERPINB12Q96P63 405 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 CHP1Q99653 195 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 BAG1Q99933 345 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 CITED1Q99966 193 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 GAL3ST1Q99999 423 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 PAPOLGQ9BWT3 736 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 ZNF717Q9BY31 904 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 SRXN1Q9BYN0 137 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 FRMD8P1Q9BZ68 369 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 JPT2Q9H910 190 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 MARCH7Q9H992 704 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 NHEJ1Q9H9Q4 299 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 ZNF275Q9NSD4 429 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 NECAP2Q9NVZ3 263 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 LYARQ9NX58 379 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 CD274Q9NZQ7 290 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 BAIAP2L1Q9UHR4 511 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 FBXO5Q9UKT4 447 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 NOSIPQ9Y314 301 aaKnown RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 SLC25A15Q9Y619 301 aa2.97□□□□□ -1.93
CHD8-212ENST00000557329 SOX21Q9Y651 276 aaPredicted RBP2.97□□□□□ -1.93
CHD8-212ENST00000557329 GJE1A6NN92 205 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 B4DXG7 233 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 J3QLI3 93 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 PLPP1O14494 284 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 ERLIN1O75477 346 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 SFTPBP07988 381 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 VIMP08670 466 aaKnown RBP2.96□□□□□ -1.94
CHD8-212ENST00000557329 QDPRP09417 244 aa2.96□□□□□ -1.94
CHD8-212ENST00000557329 CSNK2A2P19784 350 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms