RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 KIR2DS4P43632 304 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 PRSS12P56730 875 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 CTXN1P60606 82 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 SCRN3Q0VDG4 424 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 ALG10Q5BKT4 473 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 PRAMEF6Q5VXH4 476 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 FOXB2Q5VYV0 432 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 BTN2A1Q7KYR7 527 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 VMO1Q7Z5L0 202 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 LYG1Q8N1E2 194 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 CELF2-AS1Q8N7Q2 184 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 C11orf65Q8NCR3 313 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 LY6G5BQ8NDX9 201 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 BHLHE23Q8NDY6 225 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 OR1F12Q8NHA8 337 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 TMEM239Q8WW34 195 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 ERGIC1Q969X5 290 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 RASD2Q96D21 266 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 SPDL1Q96EA4 605 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 CNTD2Q9H8S5 307 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 UFSP2Q9NUQ7 469 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 TMEM100Q9NV29 134 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 RIMS3Q9UJD0 308 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
PSEN1-221ENST00000557293 ADARB2-AS1A8MUL3 147 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 EVPLLA8MZ36 301 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 H7C1C5 153 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 ADAM20O43506 726 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 OR10H3O60404 316 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 PTBP3O95758 552 aaKnown RBP10.28□□□□□ -0.76
PSEN1-221ENST00000557293 DLX1P56177 255 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 LCN6P62502 163 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 VSNL1P62760 191 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-221ENST00000557293 PIN1Q13526 163 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-221ENST00000557293 KRT71Q3SY84 523 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 CRIP3Q6Q6R5 217 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 METAP1DQ6UB28 335 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-221ENST00000557293 EPGNQ6UW88 154 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 COLCA1Q6ZS62 124 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 AENQ8WTP8 325 aaKnown RBP10.28□□□□□ -0.76
PSEN1-221ENST00000557293 PAIP2Q9BPZ3 127 aaKnown RBP10.28□□□□□ -0.76
PSEN1-221ENST00000557293 ECSITQ9BQ95 431 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 MMP28Q9H239 520 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 PPA2Q9H2U2 334 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 WDR76Q9H967 626 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 KCNK9Q9NPC2 374 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 RNF7Q9UBF6 113 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 FAM96BQ9Y3D0 163 aa10.28□□□□□ -0.76
PSEN1-221ENST00000557293 DVL1O14640 695 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 RER1O15258 196 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 RGS16O15492 202 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-221ENST00000557293 XPNPEP2O43895 674 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 MPIG6BO95866 241 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 FBP1P09467 338 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 TNFRSF1BP20333 461 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 RGS6P49758 472 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 GZMMP51124 257 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 HIST1H3AP68431 136 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 ELF3P78545 371 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-221ENST00000557293 CDONQ4KMG0 1287 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 HIST2H3PS2Q5TEC6 136 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 HIST2H3AQ71DI3 136 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 CALHM3Q86XJ0 350 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 Q8N7P7 452 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 OR5L1Q8NGL2 311 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 OR11L1Q8NGX0 322 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 NPRL2Q8WTW4 380 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 TNFRSF14Q92956 283 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 APOBEC3DQ96AK3 386 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-221ENST00000557293 MMADHCQ9H3L0 296 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-221ENST00000557293 CCDC167Q9P0B6 97 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 RPUSD1Q9UJJ7 312 aaKnown RBP10.27□□□□□ -0.77
PSEN1-221ENST00000557293 CORO2BQ9UQ03 480 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 KPTNQ9Y664 436 aa10.27□□□□□ -0.77
PSEN1-221ENST00000557293 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 A6NIZ1 184 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 IMPA2O14732 288 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 SHOX2O60902 331 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-221ENST00000557293 OR5F1O95221 314 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 IRF2P14316 349 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 CTLA4P16410 223 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 ZNF26P17031 533 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-221ENST00000557293 RAP1BP61224 184 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 RAP1AP62834 184 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 POU4F2Q12837 409 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 AQP6Q13520 282 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 C11orf91Q3C1V1 193 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 CCDC80Q76M96 950 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 PATL1Q86TB9 770 aaKnown RBP10.26□□□□□ -0.77
PSEN1-221ENST00000557293 PNKDQ8N490 385 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 KLHDC1Q8N7A1 406 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 ANKRD42Q8N9B4 389 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 BOLLQ8N9W6 283 aaKnown RBP10.26□□□□□ -0.77
PSEN1-221ENST00000557293 WFDC9Q8NEX5 89 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 ZBTB9Q96C00 473 aa10.26□□□□□ -0.77
PSEN1-221ENST00000557293 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms