RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ITPR3Q14573 2671 aa9.13□□□□□ -0.95
LINC00239-201ENST00000556973 VWC2LB2RUY7 222 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 ZNF878C9JN71 531 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 TLX2O43763 284 aaPredicted RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 PRKYO43930 277 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 TIMM8AO60220 97 aaPredicted RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 HPXP02790 462 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 LCATP04180 440 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 PSKH1P11801 424 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 RAC2P15153 192 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 KITLGP21583 273 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 OTX1P32242 354 aaPredicted RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 SLC15A1P46059 708 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 GRB2P62993 217 aaKnown RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 MRPS11P82912 194 aaKnown RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 MALLQ13021 153 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 APOFQ13790 326 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 CARTPTQ16568 116 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 ZMAT1Q5H9K5 638 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 FAM209AQ5JX71 171 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 DRAM2Q6UX65 266 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 CLEC9AQ6UXN8 241 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 FBXW12Q6X9E4 464 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 DPY19L4Q7Z388 723 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 TCEANCQ8N8B7 351 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 ZNF454Q8N9F8 522 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 OR10S1Q8NGN2 331 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 ST7LQ8TDW4 575 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 RDH5Q92781 318 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 ZMYND19Q96E35 227 aaPredicted RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 DIRC2Q96SL1 478 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 KCNJ15Q99712 375 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 SMR3AQ99954 134 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 PIMREGQ9BSJ6 248 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 GABARAPL3Q9BY60 117 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 POFUT1Q9H488 388 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 TOR3AQ9H497 397 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 GSX1Q9H4S2 264 aaPredicted RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 CENPMQ9NSP4 180 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 DECR2Q9NUI1 292 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 USE1Q9NZ43 259 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 PTTG3PQ9NZH4 202 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 H2AFY2Q9P0M6 372 aaPredicted RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 PURGQ9UJV8 347 aaKnown RBP9.12□□□□□ -0.95
LINC00239-201ENST00000556973 ORC6Q9Y5N6 252 aa9.12□□□□□ -0.95
LINC00239-201ENST00000556973 RTTNQ86VV8 2226 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 CR1P17927 2039 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 M0R135 149 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 TPD52L2O43399 206 aaKnown RBP9.11□□□□□ -0.95
LINC00239-201ENST00000556973 SPRY3O43610 288 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 IGHV1-46P01743 117 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 APOC1P02654 83 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 ALPLP05186 524 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 ADH4P08319 380 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 COL8A2P25067 703 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 GIFP27352 417 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 EPHA2P29317 976 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 POLR2IP36954 125 aaKnown RBP9.11□□□□□ -0.95
LINC00239-201ENST00000556973 NR4A2P43354 598 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 MAGEB1P43366 347 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 RAD23AP54725 363 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 RPS7P62081 194 aaKnown RBP9.11□□□□□ -0.95
LINC00239-201ENST00000556973 CCL8P80075 99 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
LINC00239-201ENST00000556973 CDK5R2Q13319 367 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 TMEM255AQ5JRV8 349 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 LCN1P1Q5VSP4 162 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 NXNL2Q5VZ03 156 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 MEPCEQ7L2J0 689 aaKnown RBP9.11□□□□□ -0.95
LINC00239-201ENST00000556973 PQLC1Q8N2U9 271 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 BBS1Q8NFJ9 593 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 OTOSQ8NHW6 89 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 TMEM163Q8TC26 289 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 THEM6Q8WUY1 208 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 STMN2Q93045 179 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 ZNF799Q96GE5 643 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 COPS4Q9BT78 406 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 ABHD6Q9BV23 337 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 RIBC2Q9H4K1 309 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 SP140LQ9H930 580 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 CHODLQ9H9P2 273 aa9.11□□□□□ -0.95
LINC00239-201ENST00000556973 YLPM1P49750 1951 aaKnown RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 HIVEP1P15822 2718 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 A0A096LNT2 108 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 SLC22A31A6NKX4 558 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 EI24O14681 340 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 BAG2O95816 211 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 LY6G6DO95868 133 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 LYNP07948 512 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 CD55P08174 381 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 SELEP16581 610 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 ACHEP22303 614 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 USF1P22415 310 aaPredicted RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 HSD11B1P28845 292 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 CRYBB2P43320 205 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 SLC6A9P48067 706 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 ALDH3A2P51648 485 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 TMEM33P57088 247 aa9.1□□□□□ -0.95
LINC00239-201ENST00000556973 GABPB1Q06547 395 aaPredicted RBP9.1□□□□□ -0.95
LINC00239-201ENST00000556973 RIN1Q13671 783 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms