RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 LCN1P1Q5VSP4 162 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 FBXW9Q5XUX1 488 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 DNM1P34Q6PK57 102 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 MEX3BQ6ZN04 569 aaKnown RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF813Q6ZN06 617 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 CFAP77Q6ZQR2 320 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 FOXL2NBQ6ZUU3 175 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 KCTD8Q6ZWB6 473 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 SLC16A9Q7RTY1 509 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 DPY19L4Q7Z388 723 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 CXorf67Q86X51 503 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 CDC20BQ86Y33 519 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 TGIF2LYQ8IUE0 185 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 GLB1L2Q8IW92 636 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 GABRG1Q8N1C3 465 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 ZFP41Q8N8Y5 198 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 TSPAN14Q8NG11 270 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 OR10H5Q8NGA6 315 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 OR10S1Q8NGN2 331 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 OR1K1Q8NGR3 316 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 THEM6Q8WUY1 208 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 SPRYD4Q8WW59 207 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 SLC7A6Q92536 515 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 BCL2L2Q92843 193 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 RFKQ969G6 155 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 TMIGD2Q96BF3 282 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 FBXO17Q96EF6 278 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 NR1H4Q96RI1 486 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 FOXB1Q99853 325 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 FOXC2Q99958 501 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 C1QTNF6Q9BXI9 259 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 MARCH7Q9H992 704 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 SMURF1Q9HCE7 757 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 B3GAT2Q9NPZ5 323 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 PLSCR4Q9NRQ2 329 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 GLRX2Q9NS18 164 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 MRPS18AQ9NVS2 196 aaKnown RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 PARPBPQ9NWS1 579 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 SLCO1C1Q9NYB5 712 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 HAO2Q9NYQ3 351 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF224Q9NZL3 707 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 DIMT1Q9UNQ2 313 aaKnown RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 MOKQ9UQ07 419 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 LHFPL6Q9Y693 200 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 SIRT4Q9Y6E7 314 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-244ENST00000556898 CNTRLQ7Z7A1 2325 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 NF1P21359 2839 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 NAV3Q8IVL0 2385 aa4.62□□□□□ -1.67
ATXN3-244ENST00000556898 DAPL1A0PJW8 107 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 C5orf63A6NC05 138 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 CENPBD1B2RD01 187 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 EEF1E1-BLOC1S5C9J1V9 151 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF587BE7ETH6 402 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 E9PLN8 166 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF670-ZNF695F2Z2N8 137 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 RPL36A-HNRNPH2H7BZ11 118 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 J3QLW9 94 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 RER1O15258 196 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 EEF1E1O43324 174 aaKnown RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 AHCYL1O43865 530 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 INMTO95050 263 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 RPP14O95059 124 aaKnown RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 HOXD4P09016 255 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 PIPP12273 146 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF823P16415 610 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF19P17023 458 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ALOX5APP20292 161 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 MSR1P21757 451 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 PCMT1P22061 227 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 MPGP29372 298 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 CAPZA2P47755 286 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 GTF2A1P52655 376 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 OR12D2P58182 307 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 MRPS34P82930 218 aaKnown RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 GLO1Q04760 184 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 RAB40BQ12829 278 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 SF3B4Q15427 424 aaKnown RBP eCLIP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 GABRA6Q16445 453 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 TBRG1Q3YBR2 411 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 TM4SF20Q53R12 229 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 XAF1Q6GPH4 301 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 SLC18B1Q6NT16 456 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF774Q6NX45 483 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF773Q6PK81 442 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF322Q6U7Q0 402 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 LRRN1Q6UXK5 716 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 HDDC2Q7Z4H3 204 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 DCXRQ7Z4W1 244 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 NAA40Q86UY6 237 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 MYPOPQ86VE0 399 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 KLBQ86Z14 1044 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 SLC22A24Q8N4F4 322 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 ZNF433Q8N7K0 673 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-244ENST00000556898 NANOGP1Q8N7R0 232 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 LINC00482Q8N8I6 264 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 WDR31Q8NA23 367 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 POMGNT2Q8NAT1 580 aa4.61□□□□□ -1.67
ATXN3-244ENST00000556898 AKR7LQ8NHP1 331 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms