RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 APEX1P27695 318 aaKnown RBP9.76□□□□□ -0.85
FOXN3-212ENST00000556541 RPS27P42677 84 aaKnown RBP9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ETV1P50549 477 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 IDH3GP51553 393 aaPredicted RBP9.76□□□□□ -0.85
FOXN3-212ENST00000556541 CCR9P51686 369 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 WNT4P56705 351 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 TUBA1BP68363 451 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 PIGFQ07326 219 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF544Q6NX49 715 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 TUBA1AQ71U36 451 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 PRSS45Q7RTY3 260 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.76□□□□□ -0.85
FOXN3-212ENST00000556541 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.76□□□□□ -0.85
FOXN3-212ENST00000556541 RFLNBQ8N5W9 214 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 CCDC54Q8NEL0 328 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 NUP37Q8NFH4 326 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 OR52H1Q8NGJ2 320 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF799Q96GE5 643 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 DOK1Q99704 481 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 TMEM204Q9BSN7 226 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 RGCCQ9H4X1 137 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 OPA3Q9H6K4 179 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 SLCO1C1Q9NYB5 712 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 ERVK-18Q9QC07 812 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 LSM2Q9Y333 95 aaKnown RBP9.76□□□□□ -0.85
FOXN3-212ENST00000556541 R4GMQ9 66 aa9.76□□□□□ -0.85
FOXN3-212ENST00000556541 A0A0U1RQV5 110 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 DEFB108AA8MXU0 73 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 C19orf84I3L1E1 186 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 CASKO14936 926 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 MYL12BO14950 172 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 MT-ND2P03891 347 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 EEF1B2P24534 225 aaKnown RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 LOXP28300 417 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 HSD11B1P28845 292 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 HCCSP53701 268 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 RPS23P62266 143 aaKnown RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 NKX6-1P78426 367 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 GPR50Q13585 617 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 TAF13Q15543 124 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 UBE2UQ5VVX9 321 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 LIPNQ5VXI9 398 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 ADAM5Q6NVV9 412 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 LRRN1Q6UXK5 716 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 Q6ZSR3 168 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 LHFPL3Q86UP9 236 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 WFDC8Q8IUA0 241 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 SPARTQ8N0X7 666 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 RNF166Q96A37 237 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 APOBEC3DQ96AK3 386 aaPredicted RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 PELI1Q96FA3 418 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 C4orf36Q96KX1 117 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 C4orf45Q96LM5 186 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 PSMG3-AS1Q96PY0 264 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 TBX5Q99593 518 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 BCL2L14Q9BZR8 327 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 CDH20Q9HBT6 801 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 CENPMQ9NSP4 180 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 FAM206AQ9NX38 181 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 CRIM1Q9NZV1 1036 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 EIF3KQ9UBQ5 218 aaKnown RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 NUFIP1Q9UHK0 495 aaKnown RBP9.75□□□□□ -0.85
FOXN3-212ENST00000556541 IKZF2Q9UKS7 526 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 SPEF1Q9Y4P9 236 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 SNX5Q9Y5X3 404 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 ADGRG4Q8IZF6 3080 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 CADP27708 2225 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 PTPN13Q12923 2485 aa9.75□□□□□ -0.85
FOXN3-212ENST00000556541 A0A1W2PR80 420 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 MAGEA13PA6NCF6 341 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 DPRXA6NFQ7 191 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 PRSS44E7EML9 344 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 OGG1O15527 345 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 CLDN1O95832 211 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 IGLV3-1P01715 115 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 CELA3BP08861 270 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 CD53P19397 219 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 PCMT1P22061 227 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 CFL1P23528 166 aaKnown RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 RAD52P43351 418 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 CX3CR1P49238 355 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF83P51522 516 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 GBX2P52951 348 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 OR12D2P58182 307 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 SPHARQ15513 63 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 OTPQ5XKR4 325 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 RPL22L1Q6P5R6 122 aaKnown RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 TMEM154Q6P9G4 183 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 MEX3BQ6ZN04 569 aaKnown RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 KRT74Q7RTS7 529 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 ZNF367Q7RTV3 350 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 MYPOPQ86VE0 399 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 YIPF7Q8N8F6 280 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 TSPAN14Q8NG11 270 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 OR5L1Q8NGL2 311 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 SMAP2Q8WU79 429 aaPredicted RBP9.74□□□□□ -0.85
FOXN3-212ENST00000556541 SPSB4Q96A44 273 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
FOXN3-212ENST00000556541 KCNS3Q9BQ31 491 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms