RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 C5orf49A4QMS7 147 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 FBP2O00757 339 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 FOXH1O75593 365 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 KNG1P01042 644 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 IFNA14P01570 189 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 COX5BP10606 129 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 MAKP20794 623 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 CPT2P23786 658 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 CDAP32320 146 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 MPV17P39210 176 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 GDI2P50395 445 aaKnown RBP8.41□□□□□ -1.06
SCFD1-220ENST00000556486 TAS2R41P59536 307 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 KRTAP10-3P60369 221 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 PCBD1P61457 104 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 SEC61A1P61619 476 aaKnown RBP8.41□□□□□ -1.06
SCFD1-220ENST00000556486 CYLC2Q14093 348 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-220ENST00000556486 ALG10Q5BKT4 473 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 ERICH5Q6P6B1 374 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 RHOUQ7L0Q8 258 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 ZER1Q7Z7L7 766 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 DEFB108BQ8NET1 73 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 MOSPD2Q8NHP6 518 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 SLC25A40Q8TBP6 338 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 CCL17Q92583 94 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 MAGEB18Q96M61 343 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 OR2H1Q9GZK4 316 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 OR2J1Q9GZK6 312 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 SLITRK2Q9H156 845 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 WNT5BQ9H1J7 359 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 TBCCD1Q9NVR7 557 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 NUP50Q9UKX7 468 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 MED31Q9Y3C7 131 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 TIMM10BQ9Y5J6 103 aa8.41□□□□□ -1.06
SCFD1-220ENST00000556486 PRSS47A8MTI9 375 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 A8MXK9 166 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 EDF1O60869 148 aaKnown RBP8.4□□□□□ -1.06
SCFD1-220ENST00000556486 TSPAN15O95858 294 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 IGHV2-70P01814 119 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 IGHV4-38-2P0DP08 117 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 LAP3P28838 519 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 CTXN1P60606 82 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 RPL27P61353 136 aaKnown RBP8.4□□□□□ -1.06
SCFD1-220ENST00000556486 PPP1CBP62140 327 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 FMODQ06828 376 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 CD47Q08722 323 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 FHL1Q13642 323 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 TMEM155Q4W5P6 130 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 TTMPQ5BVD1 217 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 MTX3Q5HYI7 312 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 RABL3Q5HYI8 236 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 ARL9Q6T311 187 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF283Q8N7M2 679 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 LRRC75AQ8NAA5 344 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 AKR7LQ8NHP1 331 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 FAM110DQ8TAY7 271 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-220ENST00000556486 DYDC1Q8WWB3 177 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 POP5Q969H6 163 aaKnown RBP8.4□□□□□ -1.06
SCFD1-220ENST00000556486 C4orf45Q96LM5 186 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 PRRC1Q96M27 445 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 ZNF583Q96ND8 569 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 RBP7Q96R05 134 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 MMP27Q9H306 513 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 ELOVL3Q9HB03 270 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 TMEM140Q9NV12 185 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 INTS9Q9NV88 658 aaKnown RBP8.4□□□□□ -1.06
SCFD1-220ENST00000556486 DCAF16Q9NXF7 216 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 PLEK2Q9NYT0 353 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 NDRG4Q9ULP0 352 aaKnown RBP8.4□□□□□ -1.06
SCFD1-220ENST00000556486 A4GNTQ9UNA3 340 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 NPTNQ9Y639 398 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 AUP1Q9Y679 476 aa8.4□□□□□ -1.06
SCFD1-220ENST00000556486 A6NIZ1 184 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 BBIP1A8MTZ0 92 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 C12orf71A8MTZ7 269 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 TRAPPC2LH3BP13 241 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 CLDN34H7C241 214 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 M0QZ24 198 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 SPRY3O43610 288 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 AHCYL1O43865 530 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 FSTL3O95633 263 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 NGFP01138 241 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 PPIAL4GP0DN37 164 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 TNFRSF1BP20333 461 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 KITLGP21583 273 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 MSR1P21757 451 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 CCNOP22674 350 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 RAP1BP61224 184 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 RAP1AP62834 184 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 ERVK-25P63136 954 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 ST3GAL3Q11203 375 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 PSG7Q13046 419 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 ENDOGQ14249 297 aaKnown RBP8.39□□□□□ -1.07
SCFD1-220ENST00000556486 SGCAQ16586 387 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 SPRNQ5BIV9 151 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 SPATA46Q5T0L3 261 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 C1orf122Q6ZSJ8 110 aa8.39□□□□□ -1.07
SCFD1-220ENST00000556486 LRRC28Q86X40 367 aaPredicted RBP8.39□□□□□ -1.07
SCFD1-220ENST00000556486 OFCC1Q8IZS5 231 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms