RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CDADC1Q9BWV3 514 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 PLA2G12AQ9BZM1 189 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 WDR76Q9H967 626 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 MAGEL2Q9UJ55 1249 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 INSIG2Q9Y5U4 225 aa18.99■□□□□ 0.63
ACTN1-220ENST00000556433 F5H0A9 414 aaPredicted RBP18.98■□□□□ 0.63
ACTN1-220ENST00000556433 ZNF205O95201 554 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 FPR3P25089 353 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 NOS3P29474 1203 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 MSX2P35548 267 aaPredicted RBP18.98■□□□□ 0.63
ACTN1-220ENST00000556433 SLC36A3Q495N2 470 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 ESCO2Q56NI9 601 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 ARMCX4Q5H9R4 360 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 RBMS3Q6XE24 437 aaKnown RBP18.98■□□□□ 0.63
ACTN1-220ENST00000556433 LINC00346Q8IVM7 164 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 SLC26A10Q8NG04 563 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 PITX2Q99697 317 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 SLC30A2Q9BRI3 323 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 RPRD1BQ9NQG5 326 aaKnown RBP18.98■□□□□ 0.63
ACTN1-220ENST00000556433 DDX28Q9NUL7 540 aaKnown RBP18.98■□□□□ 0.63
ACTN1-220ENST00000556433 TMEM100Q9NV29 134 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 NUP50Q9UKX7 468 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 TMCC3Q9ULS5 477 aa18.98■□□□□ 0.63
ACTN1-220ENST00000556433 IGHV3-64DA0A0J9YX35 117 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 CEACAM18A8MTB9 384 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 A8MXK9 166 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 IQCF6A8MYZ5 107 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 F5H5K5 113 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 SNX3O60493 162 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 HLA-DQA2P01906 255 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 WNT2P09544 360 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 HSD17B1P14061 328 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 IFNGR2P38484 337 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 SLC18B1Q6NT16 456 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 COLCA1Q6ZS62 124 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 BHLHE23Q8NDY6 225 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 OR2AJ1Q8NGZ0 328 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 NSMCE2Q96MF7 247 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 CDRT15Q96T59 188 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 MRI1Q9BV20 369 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 HCAR1Q9BXC0 346 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 TMEM165Q9HC07 324 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 OR5V1Q9UGF6 321 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 PPIAL4AQ9Y536 164 aa18.97■□□□□ 0.63
ACTN1-220ENST00000556433 OR6C68A6NDL8 312 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 F5H5P2 479 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 MLNRO43193 412 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 IDH3BO43837 385 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 CYB5R3P00387 301 aaPredicted RBP18.96■□□□□ 0.63
ACTN1-220ENST00000556433 FABP3P05413 133 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 ACSM4P0C7M7 580 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 SELEP16581 610 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 RRM2P31350 389 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 UBA52P62987 128 aaKnown RBP18.96■□□□□ 0.63
ACTN1-220ENST00000556433 ECH1Q13011 328 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 KRTAP27-1Q3LI81 207 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 SAMD4BQ5PRF9 694 aaKnown RBP18.96■□□□□ 0.63
ACTN1-220ENST00000556433 CFAP77Q6ZQR2 320 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 CPLX4Q7Z7G2 160 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 ZBTB46Q86UZ6 589 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 MOGAT3Q86VF5 341 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 SIGLECL1Q8N7X8 197 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 GNPDA2Q8TDQ7 276 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 C1QTNF5Q9BXJ0 243 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 ZNF69Q9UC07 566 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 CD300AQ9UGN4 299 aa18.96■□□□□ 0.63
ACTN1-220ENST00000556433 GSSP48637 474 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 KLF17Q5JT82 389 aaPredicted RBP18.95■□□□□ 0.62
ACTN1-220ENST00000556433 SLC35F1Q5T1Q4 408 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 NAA40Q86UY6 237 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 PGAM4Q8N0Y7 254 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 SDR9C7Q8NEX9 313 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 OR52E2Q8NGJ4 325 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 NSRP1Q9H0G5 558 aaKnown RBP18.95■□□□□ 0.62
ACTN1-220ENST00000556433 FN3KQ9H479 309 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 CYB5R1Q9UHQ9 305 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 LRCH1Q9Y2L9 728 aa18.95■□□□□ 0.62
ACTN1-220ENST00000556433 TENM1Q9UKZ4 2725 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 LRRC30A6NM36 301 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 ARPC2O15144 300 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 LCATP04180 440 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 HLA-DPB1P04440 258 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 RPS2P15880 293 aaKnown RBP18.94■□□□□ 0.62
ACTN1-220ENST00000556433 CPT2P23786 658 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 GGT2P36268 569 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 PRSS12P56730 875 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 PAX8Q06710 450 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 TSPAN31Q12999 210 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 MALLQ13021 153 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 BCL6BQ8N143 479 aaPredicted RBP18.94■□□□□ 0.62
ACTN1-220ENST00000556433 ATF6BQ99941 703 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 SSBP3Q9BWW4 388 aaPredicted RBP18.94■□□□□ 0.62
ACTN1-220ENST00000556433 IL1RAPQ9NPH3 570 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 MIOXQ9UGB7 285 aa18.94■□□□□ 0.62
ACTN1-220ENST00000556433 CD80P33681 288 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 PMELP40967 661 aa18.93■□□□□ 0.62
ACTN1-220ENST00000556433 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.93■□□□□ 0.62
ACTN1-220ENST00000556433 TRAP1Q12931 704 aaKnown RBP18.93■□□□□ 0.62
ACTN1-220ENST00000556433 GK2Q14410 553 aaPredicted RBP18.93■□□□□ 0.62
ACTN1-220ENST00000556433 ZNF181Q2M3W8 571 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms