RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 SLC25A25Q6KCM7 469 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PNCKQ6P2M8 343 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 C4orf22Q6V702 233 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PLEKHG7Q6ZR37 379 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 YRDCQ86U90 279 aaKnown RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MCOLN2Q8IZK6 566 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SLC38A6Q8IZM9 456 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TRAM1L1Q8N609 369 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 Q8N9G6 341 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 C19orf18Q8NEA5 215 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 OR8J1Q8NGP2 316 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 WDR36Q8NI36 951 aaKnown RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 LHFPL5Q8TAF8 219 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CXorf40AQ8TE69 158 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 GLYATL2Q8WU03 294 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 RASSF5Q8WWW0 418 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MRGPRFQ96AM1 343 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 DTD2Q96FN9 168 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MED8Q96G25 268 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 DUS3LQ96G46 650 aaKnown RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 VPS35Q96QK1 796 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 RAB40CQ96S21 281 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF607Q96SK3 696 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 AGPAT1Q99943 283 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TTYH2Q9BSA4 534 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MFFQ9GZY8 342 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 OR51B6Q9H340 312 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 LRRN3Q9H3W5 708 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 FN3KRPQ9HA64 309 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CHRAC1Q9NRG0 131 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PLSCR3Q9NRY6 295 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 TREX1Q9NSU2 369 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 STARD5Q9NSY2 213 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 EIF3KQ9UBQ5 218 aaKnown RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 PISDQ9UG56 409 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 CHRNA9Q9UGM1 479 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 IL20RAQ9UHF4 553 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 NAGKQ9UJ70 344 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 SLC17A4Q9Y2C5 497 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MED13LQ71F56 2210 aa3.37□□□□□ -1.87
PRPF39-209ENST00000556353 MN1Q10571 1320 aaPredicted RBP3.37□□□□□ -1.87
PRPF39-209ENST00000556353 ANKHD1Q8IWZ3 2542 aaKnown RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 IGHV5-10-1A0A0J9YXX1 117 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 TMEM129A0AVI4 362 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 J3QKU1 62 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 DFFAO00273 331 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 EEF2KO00418 725 aaKnown RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 SLC22A1O15245 554 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 ZSCAN12O43309 604 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 DUX1O43812 170 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 KIAA0513O60268 411 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 NOS1APO75052 506 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CDH16O75309 829 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 SERPINB7O75635 380 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 APOC1P02654 83 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 FGF1P05230 155 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 HLA-DQB2P05538 268 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 KRT16P08779 473 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 GNAO1P09471 354 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 SLC35E2BP0CK96 405 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 SLC35E2P0CK97 266 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 COX5BP10606 129 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 THRAP10827 490 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 LIPCP11150 499 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CD1EP15812 388 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 UCP1P25874 307 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CD1CP29017 333 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CD40LGP29965 261 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 LCN1P31025 176 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CA5AP35218 305 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CD79BP40259 229 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 FRKP42685 505 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 GNPDA1P46926 289 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 ALDH3B2P48448 385 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 TMED10P49755 219 aaKnown RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 GNG10P50151 68 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CDK9P50750 372 aaKnown RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 DUSP3P51452 185 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 CCR4P51679 360 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 UCNP55089 124 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 ARF6P62330 175 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 REEP5Q00765 189 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 MYL5Q02045 173 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 ELOCQ15369 112 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 PHYHD1Q5SRE7 291 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 LRRC66Q68CR7 880 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 PYHIN1Q6K0P9 492 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 C2orf66Q6UXQ4 117 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 NDUFAF7Q7L592 441 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 TRPM8Q7Z2W7 1104 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 PAGE2Q7Z2X7 111 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 ZDHHC21Q8IVQ6 265 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 KLHL7Q8IXQ5 586 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 C17orf78Q8N4C9 275 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 PQLC3Q8N755 202 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 TTC29Q8NA56 475 aaPredicted RBP3.36□□□□□ -1.87
PRPF39-209ENST00000556353 TMEM104Q8NE00 496 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 OR56A4Q8NGH8 313 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 ZNF596Q8TC21 504 aa3.36□□□□□ -1.87
PRPF39-209ENST00000556353 TCP10LQ8TDR4 215 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms