RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 AUP1Q9Y679 476 aa7.5□□□□□ -1.21
GTF2A1-204ENST00000556268 NOTCH1P46531 2555 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TRAPPC13A5PLN9 417 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 DNAJC9-AS1A6NH13 148 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 NPIPB13A6NJU9 1138 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 A8MXK9 166 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 EVPLLA8MZ36 301 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 NPIPB4C9JG80 1138 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 F5H0A9 414 aaPredicted RBP7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 BLOC1S5-TXNDC5H3BN57 136 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 M0R3H8 397 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TPD52L2O43399 206 aaKnown RBP7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 NGFP01138 241 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 IGHMP01871 453 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 SBK2P0C263 348 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF32P17041 273 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 FUT1P19526 365 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TUBG1P23258 451 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 AQP1P29972 269 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 GCH1P30793 250 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 CD80P33681 288 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 ZNF84P51523 738 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 PSG7Q13046 419 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 BAMBIQ13145 260 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 MELKQ14680 651 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC9A3R2Q15599 337 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC25A47Q6Q0C1 308 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 UNQ6126/PRO20091Q6UXV3 157 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 C9orf139Q6ZV77 190 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 LRRC18Q8N456 261 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 ANKRD42Q8N9B4 389 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 ST7LQ8TDW4 575 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 IPCEF1Q8WWN9 437 aaPredicted RBP7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TRIM44Q96DX7 344 aaPredicted RBP7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 SAMD8Q96LT4 415 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 CENPHQ9H3R5 247 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TCF7L1Q9HCS4 588 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 TUBG2Q9NRH3 451 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 DCAF16Q9NXF7 216 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 RAB21Q9UL25 225 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 CORO2BQ9UQ03 480 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 USH1CQ9Y6N9 552 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 WNK1Q9H4A3 2382 aa7.49□□□□□ -1.21
GTF2A1-204ENST00000556268 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 IGKV1D-43A0A0B4J1Z2 117 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 A0A1W2PRG6 482 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 PLSCR5A0PG75 271 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 C5orf49A4QMS7 147 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 CPSF4LA6NMK7 179 aaKnown RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 MPPED1O15442 326 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 MT-ND1P03886 318 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 WNT2P09544 360 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 CCNOP22674 350 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 CDAP32320 146 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 AQP2P41181 271 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 GDI2P50395 445 aaKnown RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 GZMMP51124 257 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 PPP1CBP62140 327 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 HSF2Q03933 536 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 GLO1Q04760 184 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 RPL18Q07020 188 aaKnown RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 HABP2Q14520 560 aaPredicted RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 MTX3Q5HYI7 312 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 SPATA46Q5T0L3 261 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 LEG1Q6P5S2 330 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 C16orf87Q6PH81 154 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 FOXL2NBQ6ZUU3 175 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 CCDC80Q76M96 950 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 SPICQ8N5J4 248 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 DPP10Q8N608 796 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 C11orf65Q8NCR3 313 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 GEMIN6Q8WXD5 167 aaKnown RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 HDAC2Q92769 488 aaKnown RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC25A28Q96A46 364 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 DUX5Q96PT3 197 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 SIGLEC11Q96RL6 698 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 CCDC28BQ9BUN5 200 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 OR2H1Q9GZK4 316 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 TINAGL1Q9GZM7 467 aaPredicted RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 WNT5BQ9H1J7 359 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 KCNN2Q9H2S1 579 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 NANOGQ9H9S0 305 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 TMEM106BQ9NUM4 274 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 UBAP1Q9NZ09 502 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 CCDC167Q9P0B6 97 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 STX18Q9P2W9 335 aaKnown RBP7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC7A7Q9UM01 511 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 TIMM10BQ9Y5J6 103 aa7.48□□□□□ -1.21
GTF2A1-204ENST00000556268 A0A0G2JK05 382 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 OR7A10O76100 309 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 SLC2A10O95528 541 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 FSTL3O95633 263 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 CHRM2P08172 466 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 CST2P09228 141 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 KITLGP21583 273 aa7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 RBMXP38159 391 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 RBM34P42696 430 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 DAP3P51398 398 aaKnown RBP7.47□□□□□ -1.21
GTF2A1-204ENST00000556268 CRYBA2P53672 197 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms