RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ARCQ7LC44 396 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLC26A11Q86WA9 606 aa2.57□□□□□ -2
SRP54-209ENST00000555746 HORMAD1Q86X24 394 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PLA2G4DQ86XP0 818 aa2.57□□□□□ -2
SRP54-209ENST00000555746 BBS7Q8IWZ6 715 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLC38A6Q8IZM9 456 aa2.57□□□□□ -2
SRP54-209ENST00000555746 GABRG1Q8N1C3 465 aa2.57□□□□□ -2
SRP54-209ENST00000555746 UBL4BQ8N7F7 174 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CYB561A3Q8NBI2 242 aa2.57□□□□□ -2
SRP54-209ENST00000555746 NECAP1Q8NC96 275 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PROKR2Q8NFJ6 384 aa2.57□□□□□ -2
SRP54-209ENST00000555746 OR5D13Q8NGL4 314 aa2.57□□□□□ -2
SRP54-209ENST00000555746 OR6T1Q8NGN1 323 aa2.57□□□□□ -2
SRP54-209ENST00000555746 M1APQ8TC57 530 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ACER1Q8TDN7 264 aa2.57□□□□□ -2
SRP54-209ENST00000555746 AGAP11Q8TF27 550 aa2.57□□□□□ -2
SRP54-209ENST00000555746 FAM172AQ8WUF8 416 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CRYGNQ8WXF5 182 aa2.57□□□□□ -2
SRP54-209ENST00000555746 FAM3CQ92520 227 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLC38A4Q969I6 547 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PSMG2Q969U7 264 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ECHDC3Q96DC8 303 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ASB9Q96DX5 294 aa2.57□□□□□ -2
SRP54-209ENST00000555746 DNAJC1Q96KC8 554 aaKnown RBP2.57□□□□□ -2
SRP54-209ENST00000555746 TECTBQ96PL2 329 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CSPG4P5Q96PW8 444 aa2.57□□□□□ -2
SRP54-209ENST00000555746 VPS35Q96QK1 796 aa2.57□□□□□ -2
SRP54-209ENST00000555746 CCT8L2Q96SF2 557 aa2.57□□□□□ -2
SRP54-209ENST00000555746 NAPGQ99747 312 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 WRAP53Q9BUR4 548 aaKnown RBP2.57□□□□□ -2
SRP54-209ENST00000555746 SLITRK2Q9H156 845 aa2.57□□□□□ -2
SRP54-209ENST00000555746 SLC38A1Q9H2H9 487 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ALG9Q9H6U8 611 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ANKRA2Q9H9E1 313 aa2.57□□□□□ -2
SRP54-209ENST00000555746 LYRM4Q9HD34 91 aa2.57□□□□□ -2
SRP54-209ENST00000555746 VCX3AQ9NNX9 186 aa2.57□□□□□ -2
SRP54-209ENST00000555746 RPS10P5Q9NQ39 176 aa2.57□□□□□ -2
SRP54-209ENST00000555746 XPNPEP1Q9NQW7 623 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PXMP2Q9NR77 195 aa2.57□□□□□ -2
SRP54-209ENST00000555746 INIPQ9NRY2 104 aa2.57□□□□□ -2
SRP54-209ENST00000555746 IMP3Q9NV31 184 aaKnown RBP2.57□□□□□ -2
SRP54-209ENST00000555746 USE1Q9NZ43 259 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ADA2Q9NZK5 511 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ZNF490Q9ULM2 529 aaPredicted RBP2.57□□□□□ -2
SRP54-209ENST00000555746 SCML1Q9UN30 329 aa2.57□□□□□ -2
SRP54-209ENST00000555746 ERVW-1Q9UQF0 538 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PIGLQ9Y2B2 252 aa2.57□□□□□ -2
SRP54-209ENST00000555746 POFUT2Q9Y2G5 429 aa2.57□□□□□ -2
SRP54-209ENST00000555746 STARD10Q9Y365 291 aa2.57□□□□□ -2
SRP54-209ENST00000555746 VWA8A3KMH1 1905 aa2.57□□□□□ -2
SRP54-209ENST00000555746 PLXND1Q9Y4D7 1925 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZFC3H1O60293 1989 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 CNTRLQ7Z7A1 2325 aa2.56□□□□□ -2
SRP54-209ENST00000555746 A0A0J9YVX5 310 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF233A6NK53 670 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF729A6NN14 1252 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 OR2AT4A6NND4 320 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TMEM238C9JI98 176 aa2.56□□□□□ -2
SRP54-209ENST00000555746 KLRC4-KLRK1H3BQV0 150 aa2.56□□□□□ -2
SRP54-209ENST00000555746 K7ERI5 159 aa2.56□□□□□ -2
SRP54-209ENST00000555746 SGK494L7N484 410 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TYROBPO43914 113 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF253O75346 499 aa2.56□□□□□ -2
SRP54-209ENST00000555746 BCAS1O75363 584 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 NDUFA7O95182 113 aa2.56□□□□□ -2
SRP54-209ENST00000555746 OXSR1O95747 527 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 TFPTP0C1Z6 253 aa2.56□□□□□ -2
SRP54-209ENST00000555746 HSPD1P10809 573 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 PSKH1P11801 424 aa2.56□□□□□ -2
SRP54-209ENST00000555746 CD1EP15812 388 aa2.56□□□□□ -2
SRP54-209ENST00000555746 XRCC1P18887 633 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 WARSP23381 471 aaKnown RBP2.56□□□□□ -2
SRP54-209ENST00000555746 UGT1A3P35503 534 aa2.56□□□□□ -2
SRP54-209ENST00000555746 UGT1A5P35504 534 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TGFBR2P37173 567 aa2.56□□□□□ -2
SRP54-209ENST00000555746 OMPP47874 163 aa2.56□□□□□ -2
SRP54-209ENST00000555746 P2RY4P51582 365 aa2.56□□□□□ -2
SRP54-209ENST00000555746 MLF1P58340 268 aa2.56□□□□□ -2
SRP54-209ENST00000555746 AP1S1P61966 158 aa2.56□□□□□ -2
SRP54-209ENST00000555746 HERVK_113P63132 956 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ERVK-8P63133 956 aa2.56□□□□□ -2
SRP54-209ENST00000555746 CDK16Q00536 496 aa2.56□□□□□ -2
SRP54-209ENST00000555746 IRF8Q02556 426 aa2.56□□□□□ -2
SRP54-209ENST00000555746 FUT7Q11130 342 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ORC2Q13416 577 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 ABRAXAS2Q15018 415 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNHIT3Q15649 155 aaPredicted RBP2.56□□□□□ -2
SRP54-209ENST00000555746 GUK1Q16774 197 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TRIM16LQ309B1 348 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ADPRMQ3LIE5 342 aa2.56□□□□□ -2
SRP54-209ENST00000555746 AKIRIN2Q53H80 203 aa2.56□□□□□ -2
SRP54-209ENST00000555746 SLC25A30Q5SVS4 291 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF691Q5VV52 312 aa2.56□□□□□ -2
SRP54-209ENST00000555746 TMEM225Q6GV28 225 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ANKRD26P1Q6NSI1 321 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ZNF774Q6NX45 483 aa2.56□□□□□ -2
SRP54-209ENST00000555746 LEG1Q6P5S2 330 aa2.56□□□□□ -2
SRP54-209ENST00000555746 ADAMTSL5Q6ZMM2 481 aa2.56□□□□□ -2
SRP54-209ENST00000555746 P4HA3Q7Z4N8 544 aa2.56□□□□□ -2
SRP54-209ENST00000555746 DPPA2Q7Z7J5 298 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms