RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A8MXE2 369 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 H3BMQ9 156 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 SYNGR3O43761 229 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 CCL2P13500 99 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 GABRA5P31644 462 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 KIR3DL2P43630 455 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 HTR5AP47898 357 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 TGM4P49221 684 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 TMBIM6P55061 237 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 FABP5Q01469 135 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 TGFBR3Q03167 851 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 SFRP5Q5T4F7 317 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 SYT9Q86SS6 491 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 FJX1Q86VR8 437 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 G6PC2Q9NQR9 355 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 DDX28Q9NUL7 540 aaKnown RBP8.9□□□□□ -0.98
SRP54-208ENST00000555557 FAM206AQ9NX38 181 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 ZNF629Q9UEG4 869 aaPredicted RBP8.9□□□□□ -0.98
SRP54-208ENST00000555557 R4GMQ9 66 aa8.9□□□□□ -0.98
SRP54-208ENST00000555557 C5orf63A6NC05 138 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 LOC110117498-PIK3R3F6TDL0 507 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 GABARAPO95166 117 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 ATE1O95260 518 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 APEX1P27695 318 aaKnown RBP8.9□□□□□ -0.99
SRP54-208ENST00000555557 UQCRFS1P47985 274 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 CX3CR1P49238 355 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 ZNF121P58317 390 aaPredicted RBP8.9□□□□□ -0.99
SRP54-208ENST00000555557 TLE1Q04724 770 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 HGFACQ04756 655 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 FAM27E3Q08E93 113 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 GPR50Q13585 617 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 RAB35Q15286 201 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 TMEM211Q6ICI0 200 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 STAC2Q6ZMT1 411 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 RHOUQ7L0Q8 258 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 MDP1Q86V88 176 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 CATSPERDQ86XM0 798 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 ZNF283Q8N7M2 679 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 RELL2Q8NC24 303 aaPredicted RBP8.9□□□□□ -0.99
SRP54-208ENST00000555557 IL17RDQ8NFM7 739 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 OR5AK2Q8NH90 309 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 OR1F12Q8NHA8 337 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 PRR7Q8TB68 274 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 C4orf45Q96LM5 186 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 KCNJ15Q99712 375 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 C1QTNF6Q9BXI9 259 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 B3GNT2Q9NY97 397 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 BAHCC1Q9P281 2608 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 ZNF319Q9P2F9 582 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 OR52A1Q9UKL2 312 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 STUB1Q9UNE7 303 aa8.9□□□□□ -0.99
SRP54-208ENST00000555557 A0A1W2PPK0 400 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 OR6C6A6NF89 314 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 OR4C45A6NMZ5 311 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 MSTNO14793 375 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 AGFG2O95081 481 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 ANXA2P07355 339 aaKnown RBP8.89□□□□□ -0.99
SRP54-208ENST00000555557 CCNOP22674 350 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 SLC6A9P48067 706 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 MMP16P51512 607 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 UBE2NP61088 152 aaKnown RBP8.89□□□□□ -0.99
SRP54-208ENST00000555557 RPS11P62280 158 aaKnown RBP eCLIP8.89□□□□□ -0.99
SRP54-208ENST00000555557 GRB2P62993 217 aaKnown RBP8.89□□□□□ -0.99
SRP54-208ENST00000555557 SPCS2Q15005 226 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 P2RY6Q15077 328 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 GSG1Q2KHT4 349 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 C22orf42Q6IC83 251 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 BHLHA15Q7RTS1 189 aaPredicted RBP8.89□□□□□ -0.99
SRP54-208ENST00000555557 ZNF584Q8IVC4 421 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 ZNF676Q8N7Q3 588 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 WDR31Q8NA23 367 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 OR51A4Q8NGJ6 313 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 OR10AC1Q8NH08 325 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 ZNF420Q8TAQ5 688 aaPredicted RBP8.89□□□□□ -0.99
SRP54-208ENST00000555557 ABHD4Q8TB40 342 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 RPS4Y2Q8TD47 263 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 RAB2BQ8WUD1 216 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 RGP1Q92546 391 aaPredicted RBP8.89□□□□□ -0.99
SRP54-208ENST00000555557 DOK1Q99704 481 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 PBOV1Q9GZY1 135 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 HDHD2Q9H0R4 259 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 FAIMQ9NVQ4 179 aa8.89□□□□□ -0.99
SRP54-208ENST00000555557 LOC100509620A0A075B734 347 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 M0R135 149 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 GABRPO00591 440 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 NOL3O60936 208 aaKnown RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 UBL3O95164 117 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 GNLYP22749 145 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 CRYGSP22914 178 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 DCTDP32321 178 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 MRPL28Q13084 256 aaKnown RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 ZNF829Q3KNS6 432 aaPredicted RBP8.88□□□□□ -0.99
SRP54-208ENST00000555557 FAM27D1Q5T7N8 215 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 ALKBH2Q6NS38 261 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 FDX2Q6P4F2 183 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 FAM57BQ71RH2 274 aa8.88□□□□□ -0.99
SRP54-208ENST00000555557 PRSS45Q7RTY3 260 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms