RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 C6orf226Q5I0X4 101 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 TMEM69Q5SWH9 247 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 DEGS2Q6QHC5 323 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 KDELC1Q6UW63 502 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 TGIF2LXQ8IUE1 241 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 NPWQ8N729 165 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 C11orf72Q8NBR9 251 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 ZNF502Q8TBZ5 544 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 CPNE4Q96A23 557 aaPredicted RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 DUS3LQ96G46 650 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 SLC41A3Q96GZ6 507 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 MICU1Q9BPX6 476 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 TMEM9BQ9NQ34 198 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 ZNF492Q9P255 531 aa1.01□□□□□ -2.25
SNX6-204ENST00000555541 YARS2Q9Y2Z4 477 aaKnown RBP1.01□□□□□ -2.25
SNX6-204ENST00000555541 LRRIQ3A6PVS8 624 aaPredicted RBP1□□□□□ -2.25
SNX6-204ENST00000555541 PRAMEF26H0Y7S4 382 aa1□□□□□ -2.25
SNX6-204ENST00000555541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1□□□□□ -2.25
SNX6-204ENST00000555541 H7C417 338 aa1□□□□□ -2.25
SNX6-204ENST00000555541 CHMP2AO43633 222 aa1□□□□□ -2.25
SNX6-204ENST00000555541 NOL3O60936 208 aaKnown RBP1□□□□□ -2.25
SNX6-204ENST00000555541 CCNHP51946 323 aaPredicted RBP1□□□□□ -2.25
SNX6-204ENST00000555541 UBE2E1P51965 193 aa1□□□□□ -2.25
SNX6-204ENST00000555541 TGFBIQ15582 683 aa1□□□□□ -2.25
SNX6-204ENST00000555541 PYDC2Q56P42 97 aa1□□□□□ -2.25
SNX6-204ENST00000555541 ATAD3BQ5T9A4 648 aa1□□□□□ -2.25
SNX6-204ENST00000555541 GPR107Q5VW38 600 aa1□□□□□ -2.25
SNX6-204ENST00000555541 EGFL6Q8IUX8 553 aa1□□□□□ -2.25
SNX6-204ENST00000555541 OR1J4Q8NGS1 313 aa1□□□□□ -2.25
SNX6-204ENST00000555541 CMTM2Q8TAZ6 248 aa1□□□□□ -2.25
SNX6-204ENST00000555541 SLC39A3Q9BRY0 314 aa1□□□□□ -2.25
SNX6-204ENST00000555541 ERP44Q9BS26 406 aa1□□□□□ -2.25
SNX6-204ENST00000555541 IL37Q9NZH6 218 aa1□□□□□ -2.25
SNX6-204ENST00000555541 MTFP1Q9UDX5 166 aa1□□□□□ -2.25
SNX6-204ENST00000555541 AP1M2Q9Y6Q5 423 aa1□□□□□ -2.25
SNX6-204ENST00000555541 ICE1Q9Y2F5 2266 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 A0A0J9YXV3 536 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 OVOL1O14753 267 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 OR7C2O60412 319 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 SERPIND1P05546 499 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 ATF6P18850 670 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 GGT1P19440 569 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 RBM34P42696 430 aaKnown RBP0.99□□□□□ -2.25
SNX6-204ENST00000555541 CRYBB2P43320 205 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 ARFIP1P53367 373 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 UBE2UQ5VVX9 321 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 MORN3Q6PF18 240 aaPredicted RBP0.99□□□□□ -2.25
SNX6-204ENST00000555541 CDR2LQ86X02 465 aaPredicted RBP0.99□□□□□ -2.25
SNX6-204ENST00000555541 GTPBP8Q8N3Z3 284 aaPredicted RBP0.99□□□□□ -2.25
SNX6-204ENST00000555541 CSGALNACT2Q8N6G5 542 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 ZNF645Q8N7E2 425 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 LRRC75AQ8NAA5 344 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 LY6G5BQ8NDX9 201 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 OR10G6Q8NH81 332 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 SLC7A13Q8TCU3 470 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 GPR82Q96P67 336 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 MARVELD1Q9BSK0 173 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 IKZF2Q9UKS7 526 aa0.99□□□□□ -2.25
SNX6-204ENST00000555541 IGLV10-54A0A075B6I4 117 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 ARHGEF35A5YM69 484 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 OR52A4PA6NMU1 304 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 KLHL41O60662 606 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 SCELO95171 688 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 FSTL3O95633 263 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 CEBPDP49716 269 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 CMC4P56277 68 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 BIKQ13323 160 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 Q6ZSR3 168 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 TMEM150AQ86TG1 271 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 CHST4Q8NCG5 386 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 SYAP1Q96A49 352 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 TMEM230Q96A57 120 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 TRIM45Q9H8W5 580 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 TMEM27Q9HBJ8 222 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 FGF20Q9NP95 211 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 NLE1Q9NVX2 485 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 PDP1Q9P0J1 537 aaPredicted RBP0.98□□□□□ -2.25
SNX6-204ENST00000555541 LTBP2Q14767 1821 aa0.98□□□□□ -2.25
SNX6-204ENST00000555541 KIAA1671Q9BY89 1806 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 C15orf38-AP3S2A0A0A6YYH1 394 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 IGHV1-69DA0A0B4J2H0 117 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 SDHAF1A6NFY7 115 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 TNFRSF11BO00300 401 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 CDC40O60508 579 aaKnown RBP eCLIP0.97□□□□□ -2.25
SNX6-204ENST00000555541 CD28P10747 220 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 U2AF2P26368 475 aaKnown RBP eCLIP0.97□□□□□ -2.252e-8■■■□□ 17.8
SNX6-204ENST00000555541 CDH6P55285 790 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 RPS23P62266 143 aaKnown RBP0.97□□□□□ -2.25
SNX6-204ENST00000555541 ELF3P78545 371 aaPredicted RBP0.97□□□□□ -2.25
SNX6-204ENST00000555541 CYP24A1Q07973 514 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 PNOCQ13519 176 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 SLC25A35Q3KQZ1 300 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 APOBEC3HQ6NTF7 200 aaKnown RBP0.97□□□□□ -2.25
SNX6-204ENST00000555541 ERO1BQ86YB8 467 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 OR2Z1Q8NG97 314 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 GPR151Q8TDV0 419 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 OR5B12Q96R08 314 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 ASF1BQ9NVP2 202 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 NUP50Q9UKX7 468 aa0.97□□□□□ -2.25
SNX6-204ENST00000555541 MCTS1Q9ULC4 181 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms