RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ATG16L2Q8NAA4 619 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 BBS1Q8NFJ9 593 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 OR6K6Q8NGW6 343 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 OTULINQ96BN8 352 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 DUS3LQ96G46 650 aaKnown RBP11.61□□□□□ -0.55
SNX6-203ENST00000555416 ATF6BQ99941 703 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 C1QTNF5Q9BXJ0 243 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 MMADHCQ9H3L0 296 aaPredicted RBP11.61□□□□□ -0.55
SNX6-203ENST00000555416 DCAF16Q9NXF7 216 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 KCNG2Q9UJ96 466 aa11.61□□□□□ -0.55
SNX6-203ENST00000555416 IGHV1-69-2A0A0G2JMI3 117 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 TLX2O43763 284 aaPredicted RBP11.6□□□□□ -0.55
SNX6-203ENST00000555416 CRLF1O75462 422 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 IFNGP01579 166 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 ADH4P08319 380 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 SPARCP09486 303 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 ZNF3P17036 446 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 EPHA2P29317 976 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 FMO3P31513 532 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 CRYBB2P43320 205 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 GPR6P46095 362 aaPredicted RBP11.6□□□□□ -0.55
SNX6-203ENST00000555416 ENTPD1P49961 510 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 MRPS11P82912 194 aaKnown RBP11.6□□□□□ -0.55
SNX6-203ENST00000555416 PPP2R2BQ00005 443 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 CDK5R2Q13319 367 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 MOGQ16653 247 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 PCGF3Q3KNV8 242 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 CYB5R2Q6BCY4 276 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 OR2T2Q6IF00 324 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 PLBD1Q6P4A8 553 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 FBXW12Q6X9E4 464 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 SPATC1Q76KD6 591 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 ZNF540Q8NDQ6 660 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 OR5K1Q8NHB7 308 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 ST7LQ8TDW4 575 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 LRTOMTQ8WZ04 291 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 APOBEC3DQ96AK3 386 aaPredicted RBP11.6□□□□□ -0.55
SNX6-203ENST00000555416 NRBF2Q96F24 287 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 DCLRE1CQ96SD1 692 aaKnown RBP11.6□□□□□ -0.55
SNX6-203ENST00000555416 AMELYQ99218 206 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 OR51V1Q9H2C8 321 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 ZNF556Q9HAH1 456 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 DDX28Q9NUL7 540 aaKnown RBP11.6□□□□□ -0.55
SNX6-203ENST00000555416 AP4S1Q9Y587 144 aa11.6□□□□□ -0.55
SNX6-203ENST00000555416 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.59□□□□□ -0.555e-10■■■□□ 16.1
SNX6-203ENST00000555416 PLSCR5A0PG75 271 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 A8MV72 311 aaPredicted RBP11.59□□□□□ -0.55
SNX6-203ENST00000555416 M0R129 80 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 TPD52L2O43399 206 aaKnown RBP11.59□□□□□ -0.55
SNX6-203ENST00000555416 PPIHO43447 177 aaKnown RBP11.59□□□□□ -0.55
SNX6-203ENST00000555416 RAC2P15153 192 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 OTX1P32242 354 aaPredicted RBP11.59□□□□□ -0.55
SNX6-203ENST00000555416 RGS6P49758 472 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 CHN2P52757 468 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 SNAI3Q3KNW1 292 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 TEX30Q5JUR7 227 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 FAM209AQ5JX71 171 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 AVPI1Q5T686 147 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 CPOQ8IVL8 374 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 TIGD4Q8IY51 512 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 CLDND2Q8NHS1 167 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 ZMYND19Q96E35 227 aaPredicted RBP11.59□□□□□ -0.55
SNX6-203ENST00000555416 MARCH7Q9H992 704 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 SAP30LQ9HAJ7 183 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 SLC25A19Q9HC21 320 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
SNX6-203ENST00000555416 DECR2Q9NUI1 292 aa11.59□□□□□ -0.55
SNX6-203ENST00000555416 LOC100289279A0A1B0GTE1 492 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 H0YL77 283 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 J3QW42 95 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 M0R135 149 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 SELENOFO60613 162 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 GLCEO94923 617 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 MT-ND5P03915 603 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 LCATP04180 440 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 CD55P08174 381 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 SLC2A1P11166 492 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 SLC2A5P22732 501 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 TUBG1P23258 451 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 IGFBP5P24593 272 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 GSTT1P30711 240 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 GZMKP49863 264 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 PRKXP51817 358 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 CRISP1P54107 249 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 TMEM33P57088 247 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 LMO4P61968 165 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 TNFAIP6P98066 277 aaPredicted RBP11.58□□□□□ -0.56
SNX6-203ENST00000555416 MVKQ03426 396 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 ECH1Q13011 328 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 GK2Q14410 553 aaPredicted RBP11.58□□□□□ -0.56
SNX6-203ENST00000555416 DPY19L4Q7Z388 723 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 BCDIN3DQ7Z5W3 292 aaKnown RBP11.58□□□□□ -0.56
SNX6-203ENST00000555416 ERI1Q8IV48 349 aaKnown RBP11.58□□□□□ -0.56
SNX6-203ENST00000555416 BHLHE23Q8NDY6 225 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 OR2Z1Q8NG97 314 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 OR6N2Q8NGY6 317 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 PYDC1Q8WXC3 89 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 SLAMF6Q96DU3 332 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 ELMOD3Q96FG2 381 aa11.58□□□□□ -0.56
SNX6-203ENST00000555416 ZNF799Q96GE5 643 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms