RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 ATP5OP48047 213 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 ARG2P78540 354 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 QPRTQ15274 297 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 PSMD5Q16401 504 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 DEFB116Q30KQ4 102 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 ANXA8L1Q5VT79 327 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 UBE2UQ5VVX9 321 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 TMEM220Q6QAJ8 160 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 MBOAT1Q6ZNC8 495 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 TTC29Q8NA56 475 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 NOXO1Q8NFA2 376 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 ECHDC3Q96DC8 303 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 MICU1Q9BPX6 476 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 CHAC1Q9BUX1 264 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 PLA2G2FQ9BZM2 168 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 VCXQ9H320 206 aa3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 RPP21Q9H633 154 aaKnown RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 CPSF1Q10570 1443 aaKnown RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 SMG6Q86US8 1419 aaKnown RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 CDK12Q9NYV4 1490 aaPredicted RBP3.41□□□□□ -1.86
CKS1BP1-201ENST00000555221 KIF1AQ12756 1690 aa3.4□□□□□ -1.86
CKS1BP1-201ENST00000555221 ROBO1Q9Y6N7 1651 aa3.4□□□□□ -1.86
CKS1BP1-201ENST00000555221 KBTBD11-OT1A0A1B0GTJ5 212 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 MAGEB4O15481 346 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 ADGRB2O60241 1585 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 DNAJB6O75190 326 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CT45A6P0DMU7 189 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CT45A5P0DMU8 189 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CT45A7P0DMV0 189 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR5H8P0DN80 308 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 MAGP20916 626 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CSNK1A1P48729 337 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF138P52744 262 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 VSX2P58304 361 aaPredicted RBP3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 SP4Q02446 784 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 TRAM2Q15035 370 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZNF726P1Q15940 193 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CT45A1Q5HYN5 189 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 TMEM53Q6P2H8 277 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 ARL9Q6T311 187 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 KNDC1Q76NI1 1749 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 PRSS58Q8IYP2 241 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 FAM86B1Q8N7N1 296 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 BBOF1Q8ND07 529 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CT45A3Q8NHU0 189 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 NTAN1Q96AB6 310 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 GALNT14Q96FL9 552 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR2A5Q96R48 311 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 BPIFA3Q9BQP9 254 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 UNC79Q9P2D8 2635 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 CLN8Q9UBY8 286 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 PIKFYVEQ9Y2I7 2098 aa3.4□□□□□ -1.87
CKS1BP1-201ENST00000555221 KIAA0232Q92628 1395 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 PLEKHG2Q9H7P9 1386 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 IFT172Q9UG01 1749 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 BLMP54132 1417 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 SMKR1H3BMG3 65 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 MED6O75586 246 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 ARG1P05089 322 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 SPESP1Q6UW49 350 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 COMMD1Q8N668 190 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR5K2Q8NHB8 316 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 NUBPLQ8TB37 319 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 ABHD3Q8WU67 409 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 TMEM230Q96A57 120 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 EEF1AKMT3Q96AZ1 226 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 TM4SF18Q96CE8 201 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 PRRC1Q96M27 445 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 ANP32EQ9BTT0 268 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 ACTR3CQ9C0K3 210 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 NTN4Q9HB63 628 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 CCNB1IP1Q9NPC3 277 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 PTTG3PQ9NZH4 202 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 TRMT112Q9UI30 125 aaKnown RBP3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 PSG11Q9UQ72 335 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 PXDNQ92626 1479 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 CUL9Q8IWT3 2517 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 PHLPP1O60346 1717 aa3.39□□□□□ -1.87
CKS1BP1-201ENST00000555221 A0A1W2PP64 1363 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 RTL1A6NKG5 1358 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 INSRP06213 1382 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 FLT4P35916 1363 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 STRCP1A6NGW2 1772 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 SSH2Q76I76 1423 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 ANKRD63C9JTQ0 380 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 AIREO43918 545 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 CTAG2O75638 210 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 CCNB2O95067 398 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 OR8G3PP0DMU2 310 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 CEACAM3P40198 252 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 RND2P52198 227 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 CRISP1P54107 249 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 RAP1AP62834 184 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 IFT88Q13099 833 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 TFDP3Q5H9I0 405 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 OFCC1Q8IZS5 231 aa3.38□□□□□ -1.87
CKS1BP1-201ENST00000555221 JAGN1Q8N5M9 183 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms