RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 OR10AC1Q8NH08 325 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 RGP1Q92546 391 aaPredicted RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 GHSRQ92847 366 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 CENPOQ9BU64 300 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 DDX28Q9NUL7 540 aaKnown RBP9.37□□□□□ -0.91
TDP1-211ENST00000555178 B3GNT2Q9NY97 397 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ENPP5Q9UJA9 477 aa9.37□□□□□ -0.91
TDP1-211ENST00000555178 ANKHD1Q8IWZ3 2542 aaKnown RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 H3BMQ9 156 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 THBDP07204 575 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 APEX1P27695 318 aaKnown RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 CRYBB2P43320 205 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 HTR5AP47898 357 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 VBP1P61758 197 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 FABP5Q01469 135 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 TAF13Q15543 124 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 NRN1LQ496H8 165 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 MDP1Q86V88 176 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 OR51A4Q8NGJ6 313 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 C4orf45Q96LM5 186 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 HDHD5Q9BXW7 423 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 RNF121Q9H920 327 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 ISYNA1Q9NPH2 558 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 FAM206AQ9NX38 181 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 NPAP1Q9NZP6 1156 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 ZNF319Q9P2F9 582 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 PLCE1Q9P212 2302 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 SMIM31A0A1B0GVY4 71 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 TMEM269A0A1B0GVZ9 245 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 OGG1O15527 345 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 PLPP2O43688 288 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 GABARAPO95166 117 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 TACSTD2P09758 323 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 HSD11B1P28845 292 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 UGT2B10P36537 528 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 CX3CR1P49238 355 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 SH3BGRP55822 239 aaPredicted RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 ZNF121P58317 390 aaPredicted RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 RAB1AP62820 205 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 BDH1Q02338 343 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 SCRN3Q0VDG4 424 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 ALKBH1Q13686 389 aaKnown RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 RAB35Q15286 201 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 FAM27D1Q5T7N8 215 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 RPL22L1Q6P5R6 122 aaKnown RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 ANKRD13BQ86YJ7 626 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 PAQR4Q8N4S7 273 aaPredicted RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 IL17RDQ8NFM7 739 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 RPS4Y2Q8TD47 263 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 C12orf43Q96C57 262 aaKnown RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 ORAI1Q96D31 301 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 MRPL48Q96GC5 212 aaKnown RBP9.36□□□□□ -0.91
TDP1-211ENST00000555178 SOX7Q9BT81 388 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 PIGMQ9H3S5 423 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 G6PC2Q9NQR9 355 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 SLC17A5Q9NRA2 495 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 TIMM10BQ9Y5J6 103 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 R4GMQ9 66 aa9.36□□□□□ -0.91
TDP1-211ENST00000555178 LOC100509620A0A075B734 347 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 OR6C6A6NF89 314 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 OR4C45A6NMZ5 311 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 LOC110117498-PIK3R3F6TDL0 507 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 AIREO43918 545 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 ATE1O95260 518 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 CNOT4O95628 575 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 PLA2G2AP14555 144 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 CRYGSP22914 178 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 PRSS12P56730 875 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 RPS11P62280 158 aaKnown RBP eCLIP9.35□□□□□ -0.91
TDP1-211ENST00000555178 ABCA4P78363 2273 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 TAB1Q15750 504 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 SLC36A2Q495M3 483 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 KCTD20Q7Z5Y7 419 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 CATSPERDQ86XM0 798 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 ZNF283Q8N7M2 679 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 OR1F12Q8NHA8 337 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 NDNFQ8TB73 568 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 CA5BP1Q8WTZ4 195 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 ZC3HAV1LQ96H79 300 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 ACTR6Q9GZN1 396 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 PPIL3Q9H2H8 161 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 EXOSC4Q9NPD3 245 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 RSL24D1Q9UHA3 163 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 CENPEQ02224 2701 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 TACC2O95359 2948 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 A0A1W2PPK0 400 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 PSMB1P20618 241 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 GABRA5P31644 462 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 TTKP33981 857 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 SLC6A9P48067 706 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 TGM4P49221 684 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 TAS2R43P59537 309 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 PSMA6P60900 246 aaKnown RBP9.35□□□□□ -0.91
TDP1-211ENST00000555178 TGFBR3Q03167 851 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 SPCS2Q15005 226 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 P2RY6Q15077 328 aa9.35□□□□□ -0.91
TDP1-211ENST00000555178 GSG1Q2KHT4 349 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms