RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 WDR74Q6RFH5 385 aaPredicted RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 CLEC18BQ6UXF7 455 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 UNQ9370/PRO34162Q6UXP9 181 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 THOC6Q86W42 341 aaKnown RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 RALGPS2Q86X27 583 aaPredicted RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 ZNF738Q8NE65 137 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 OR10G3Q8NGC4 313 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 OR2A1Q8NGT9 310 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 OR6X1Q8NH79 312 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 ZNF461Q8TAF7 563 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 VN1R17PQ8TDU5 208 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 SMIM10Q96HG1 83 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 RIOK2Q9BVS4 552 aaKnown RBP3.94□□□□□ -1.78
VRK1-203ENST00000555067 SHCBP1LQ9BZQ2 653 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 SDHAF2Q9NX18 166 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 BTNL2Q9UIR0 455 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 ST3GAL6Q9Y274 331 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 RAD50Q92878 1312 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 HCFC1P51610 2035 aa3.94□□□□□ -1.78
VRK1-203ENST00000555067 IGHV3OR16-13A0A075B7E8 117 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 TRAV9-2A0A087WT02 112 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 DFFAO00273 331 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 GABRPO00591 440 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 GCGP01275 180 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 GFAPP14136 432 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 USF1P22415 310 aaPredicted RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 VDAC2P45880 294 aaPredicted RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 OR2B8PP59922 312 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 NUTF2P61970 127 aaKnown RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 SELENOTP62341 195 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 CLINT1Q14677 625 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 ATP6AP1Q15904 470 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 LRRC36Q1X8D7 754 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 C15orf32Q32M92 178 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 RWDD4Q6NW29 188 aaKnown RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 C8orf74Q6P047 294 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 NPSR1Q6W5P4 371 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 ZNF620Q6ZNG0 422 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 MBOAT2Q6ZWT7 520 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 TMUB2Q71RG4 321 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 ZADH2Q8N4Q0 377 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 LRRC52Q8N7C0 313 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 CCDC71LQ8N9Z2 235 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 CDC26Q8NHZ8 85 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 ITLN1Q8WWA0 313 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 GABRG3Q99928 467 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 TREX1Q9NSU2 369 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 NLE1Q9NVX2 485 aaPredicted RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 DPM3Q9P2X0 92 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 CTSZQ9UBR2 303 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 UGT2A1Q9Y4X1 527 aa3.93□□□□□ -1.78
VRK1-203ENST00000555067 USP42Q9H9J4 1324 aaKnown RBP3.93□□□□□ -1.78
VRK1-203ENST00000555067 ATRXP46100 2492 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 A0A1B0GTI1 187 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 GOLGA6L10A6NI86 522 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 H7C2Y5 167 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 PLPP3O14495 311 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 HDAC3O15379 428 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 SRP72O76094 671 aaKnown RBP3.92□□□□□ -1.78
VRK1-203ENST00000555067 AIFM1O95831 613 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 OR8U9P0C7N5 309 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 PET100P0DJ07 73 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 GGT1P19440 569 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 RAB5AP20339 215 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 GNRHRP30968 328 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 PRKAR2BP31323 418 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 MAS1LP35410 378 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 SERPINB5P36952 375 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 FABP6P51161 128 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 HCCSP53701 268 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 TAS2R39P59534 338 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 PRPS1P60891 318 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 MXD1Q05195 221 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 COQ5Q5HYK3 327 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 GCSAMLQ5JQS6 135 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 UBE2UQ5VVX9 321 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 FAM19A1Q7Z5A9 133 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 FBXO16Q8IX29 292 aaPredicted RBP3.92□□□□□ -1.78
VRK1-203ENST00000555067 OR4F15Q8NGB8 312 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 OR8U1Q8NH10 309 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 OR51E1Q8TCB6 317 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 RNASEH2CQ8TDP1 164 aaKnown RBP3.92□□□□□ -1.78
VRK1-203ENST00000555067 SDR42E1Q8WUS8 393 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 APH1BQ8WW43 257 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 CHMP6Q96FZ7 201 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 RANBP9Q96S59 729 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 GPR21Q99679 349 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 TSG101Q99816 390 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 ADNPQ9H2P0 1102 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 RPF2Q9H7B2 306 aaKnown RBP3.92□□□□□ -1.78
VRK1-203ENST00000555067 REEP1Q9H902 201 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 IFT46Q9NQC8 304 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 C1orf109Q9NX04 203 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 RHBDL2Q9NX52 303 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 KLHL21Q9UJP4 597 aa3.92□□□□□ -1.78
VRK1-203ENST00000555067 GON4LQ3T8J9 2241 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 ANKRD65E5RJM6 399 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 AGPAT2O15120 278 aa3.91□□□□□ -1.78
VRK1-203ENST00000555067 RTL8CO15255 209 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms