RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ZNF718Q3SXZ3 478 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 ZIK1Q3SY52 487 aaPredicted RBP10.54□□□□□ -0.72
SYNE2-214ENST00000554928 TEX30Q5JUR7 227 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 Q6ZR03 302 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 COLCA1Q6ZS62 124 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 PQLC1Q8N2U9 271 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 TCEANCQ8N8B7 351 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 C10orf105Q8TEF2 133 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 UBE2FQ969M7 185 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 CMBLQ96DG6 245 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 SLAMF6Q96DU3 332 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 PLEKHA8Q96JA3 519 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 C18orf12Q96KH6 178 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 INTS14Q96SY0 518 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 MBOAT4Q96T53 435 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 ABHD6Q9BV23 337 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 ELOVL3Q9HB03 270 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 CENPMQ9NSP4 180 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 DDX28Q9NUL7 540 aaKnown RBP10.54□□□□□ -0.72
SYNE2-214ENST00000554928 USE1Q9NZ43 259 aa10.54□□□□□ -0.72
SYNE2-214ENST00000554928 E9PQ18 207 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 BAG2O95816 211 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 INHBBP09529 407 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 DAOP14920 347 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 COL8A2P25067 703 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 GCH1P30793 250 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 PRKXP51817 358 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 RPS7P62081 194 aaKnown RBP10.53□□□□□ -0.72
SYNE2-214ENST00000554928 GABPB1Q06547 395 aaPredicted RBP10.53□□□□□ -0.72
SYNE2-214ENST00000554928 KRTAP1-1Q07627 177 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 TSTQ16762 297 aaKnown RBP10.53□□□□□ -0.72
SYNE2-214ENST00000554928 SNAI3Q3KNW1 292 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 AADACL4Q5VUY2 407 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 Q71RC1 249 aaPredicted RBP10.53□□□□□ -0.72
SYNE2-214ENST00000554928 OR5AS1Q8N127 324 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 RFLNBQ8N5W9 214 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 TMEM163Q8TC26 289 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 YIPF5Q969M3 257 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 RBM4BQ9BQ04 359 aaKnown RBP10.53□□□□□ -0.72
SYNE2-214ENST00000554928 C1QTNF5Q9BXJ0 243 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 RAB1BQ9H0U4 201 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 MSL2Q9HCI7 577 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 AASSQ9UDR5 926 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 PURGQ9UJV8 347 aaKnown RBP10.53□□□□□ -0.72
SYNE2-214ENST00000554928 CACNG2Q9Y698 323 aa10.53□□□□□ -0.72
SYNE2-214ENST00000554928 C17orf100A8MU93 164 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 VWC2LB2RUY7 222 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 M0R135 149 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 PRODHO43272 600 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 SPRY3O43610 288 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 IGHV1-46P01743 117 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 LCATP04180 440 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 OTX1P32242 354 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-214ENST00000554928 ALDH3A2P51648 485 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 CCL8P80075 99 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 OR2T2Q6IF00 324 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 CLEC2AQ6UVW9 174 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 OR2AE1Q8NHA4 323 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 NEU4Q8WWR8 484 aaPredicted RBP10.52□□□□□ -0.73
SYNE2-214ENST00000554928 FAM168AQ92567 244 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF799Q96GE5 643 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 DCLRE1CQ96SD1 692 aaKnown RBP10.52□□□□□ -0.73
SYNE2-214ENST00000554928 TEAD3Q99594 435 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 COPS4Q9BT78 406 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 TTTY10Q9BZA0 68 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 SLCO1C1Q9NYB5 712 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 COPS3Q9UNS2 423 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 N6AMT1Q9Y5N5 214 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 ZANQ9Y493 2812 aa10.52□□□□□ -0.73
SYNE2-214ENST00000554928 MTORP42345 2549 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 ERICH4A6NGS2 130 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 PSMD9O00233 223 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 TIMM8AO60220 97 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-214ENST00000554928 CDC14BO60729 498 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 APOL3O95236 402 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 LY6G6DO95868 133 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 KITLGP21583 273 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 OPRL1P41146 370 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 PDLIM4P50479 330 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF81P51508 661 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 BLVRAP53004 296 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 ECH1Q13011 328 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 SLC35D3Q5M8T2 416 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 ARL9Q6T311 187 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 MEPCEQ7L2J0 689 aaKnown RBP10.51□□□□□ -0.73
SYNE2-214ENST00000554928 PRSS45Q7RTY3 260 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 OTOSQ8NHW6 89 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 UBASH3BQ8TF42 649 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 RNF133Q8WVZ7 376 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 APOBEC3DQ96AK3 386 aaPredicted RBP10.51□□□□□ -0.73
SYNE2-214ENST00000554928 HAVCR1Q96D42 359 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 KCNJ15Q99712 375 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 RHNO1Q9BSD3 238 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 BPESC1Q9GZL8 116 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 MS4A5Q9H3V2 200 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 TOR3AQ9H497 397 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 TREM2Q9NZC2 230 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 DNAJC27Q9NZQ0 273 aa10.51□□□□□ -0.73
SYNE2-214ENST00000554928 ZNF319Q9P2F9 582 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms