RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 MAGOHP61326 146 aaKnown RBP3.45□□□□□ -1.86
SCFD1-211ENST00000554437 DR1Q01658 176 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 TPBGQ13641 420 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 GGTLC2Q14390 218 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 MAD2L1BPQ15013 274 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-211ENST00000554437 TAL2Q16559 108 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 PARP15Q460N3 678 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 OTPQ5XKR4 325 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 FAM173BQ6P4H8 233 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 AHSA2Q719I0 299 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 GDPD3Q7L5L3 318 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 SSX7Q7RTT5 188 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 PIANPQ8IYJ0 282 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 DUSP18Q8NEJ0 188 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 VN1R2Q8NFZ6 395 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 OR2A12Q8NGT7 310 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 FGGYQ96C11 551 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 LINC00167Q96N53 147 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF184Q99676 751 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-211ENST00000554437 FOXC2Q99958 501 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 NICN1Q9BSH3 213 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 ACTR6Q9GZN1 396 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 CHRNA10Q9GZZ6 450 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 NXF3Q9H4D5 531 aaKnown RBP3.45□□□□□ -1.86
SCFD1-211ENST00000554437 UBE2ZQ9H832 354 aaPredicted RBP3.45□□□□□ -1.86
SCFD1-211ENST00000554437 PLEKHA1Q9HB21 404 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 MRM3Q9HC36 420 aaKnown RBP3.45□□□□□ -1.86
SCFD1-211ENST00000554437 C1orf109Q9NX04 203 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 OR1A1Q9P1Q5 309 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 GNPTGQ9UJJ9 305 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 PLLPQ9Y342 182 aa3.45□□□□□ -1.86
SCFD1-211ENST00000554437 MROH7Q68CQ1 1323 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 A0A0A6YYD5 115 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 SMIM28A0A1B0GU29 152 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF705EA8MWA4 302 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-211ENST00000554437 MGRN1O60291 552 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 DEXIO95424 95 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 SEMG1P04279 462 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 OR8U8P0C7N1 319 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 RBMY1CP0DJD4 496 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF250P15622 560 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 HLA-GP17693 338 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 TBPP20226 339 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 SHMT2P34897 504 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 PPP1R2P41236 205 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 ACTR1BP42025 376 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 PLK1P53350 603 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 BIDP55957 195 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 WNT4P56705 351 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 TAS2R60P59551 318 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 OR2B8PP59922 312 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 VBP1P61758 197 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 B2MP61769 119 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 MED21Q13503 144 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 ARL6IP1Q15041 203 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 GOLGA7BQ2TAP0 167 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 VAX1Q5SQQ9 334 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 PPP1R2P3Q6NXS1 205 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 CD300LGQ6UXG3 332 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 COX15Q7KZN9 410 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 NRMQ8IXM6 262 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 PUSL1Q8N0Z8 303 aaKnown RBP3.44□□□□□ -1.86
SCFD1-211ENST00000554437 FTMTQ8N4E7 242 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF557Q8N988 423 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-211ENST00000554437 OR2Y1Q8NGV0 311 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 IFT81Q8WYA0 676 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 C9orf16Q9BUW7 83 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 ZNF426Q9BUY5 554 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 HES7Q9BYE0 225 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 CHIAQ9BZP6 476 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 DERL2Q9GZP9 239 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 FOLH1BQ9HBA9 442 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 C6orf50Q9HD87 102 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 CHD4Q14839 1912 aa3.44□□□□□ -1.86
SCFD1-211ENST00000554437 TRAV8-7A0A075B6U6 113 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 WI2-2373I1.2A0A1W2PRP0 233 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ANKRD20A5PA0PJZ0 165 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 OR6C70A6NIJ9 312 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GOLGA8JA6NMD2 632 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GOLGA8KD6RF30 607 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GOLGA8MH3BSY2 632 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 PLPP3O14495 311 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GPR171O14626 319 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ALOX12BO75342 701 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 FKBP6O75344 327 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 TRAPPC6AO75865 159 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 RPP14O95059 124 aaKnown RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 TIMP1P01033 207 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GOLGA8HP0CJ92 632 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CT45A6P0DMU7 189 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CT45A5P0DMU8 189 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CT45A7P0DMV0 189 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CALM1P0DP23 149 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CALM2P0DP24 149 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CALM3P0DP25 149 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 MLNP12872 115 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 GFAPP14136 432 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 CSNK2A2P19784 350 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-211ENST00000554437 ATP6V1B2P21281 511 aa3.43□□□□□ -1.86
SCFD1-211ENST00000554437 HLA-DMAP28067 261 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms