RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 RIBC2Q9H4K1 309 aa19.87■□□□□ 0.77
NEK9-203ENST00000553945 MARCH7Q9H992 704 aa19.87■□□□□ 0.77
NEK9-203ENST00000553945 LYNX1G3V0Z9 82 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 J3QW42 95 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 LYNX1P0DP58 116 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 MAGEB1P43366 347 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 ZNF81P51508 661 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 APOFQ13790 326 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 DPY19L4Q7Z388 723 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 NAA40Q86UY6 237 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 TIGD4Q8IY51 512 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 ST7LQ8TDW4 575 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 PIMREGQ9BSJ6 248 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 COPS4Q9BT78 406 aa19.86■□□□□ 0.77
NEK9-203ENST00000553945 DDX28Q9NUL7 540 aaKnown RBP19.86■□□□□ 0.77
NEK9-203ENST00000553945 CHD3Q12873 2000 aaKnown RBP19.86■□□□□ 0.77
NEK9-203ENST00000553945 M0R129 80 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 M0R135 149 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 NDUFS8O00217 210 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 PRKYO43930 277 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 HPXP02790 462 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 LCATP04180 440 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 SLC2A5P22732 501 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 MMP15P51511 669 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 HLXQ14774 488 aaPredicted RBP19.85■□□□□ 0.77
NEK9-203ENST00000553945 TSTQ16762 297 aaKnown RBP19.85■□□□□ 0.77
NEK9-203ENST00000553945 PCGF3Q3KNV8 242 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 SLC35D3Q5M8T2 416 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 C12orf73Q69YU5 71 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 CLEC9AQ6UXN8 241 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 ZNF786Q8N393 782 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 TCEANCQ8N8B7 351 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 ZNF799Q96GE5 643 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 C1QTNF5Q9BXJ0 243 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 CYSLTR2Q9NS75 346 aa19.85■□□□□ 0.77
NEK9-203ENST00000553945 PURGQ9UJV8 347 aaKnown RBP19.85■□□□□ 0.77
NEK9-203ENST00000553945 ZNF878C9JN71 531 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 TPD52L2O43399 206 aaKnown RBP19.84■□□□□ 0.77
NEK9-203ENST00000553945 SPRY3O43610 288 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 TLX2O43763 284 aaPredicted RBP19.84■□□□□ 0.77
NEK9-203ENST00000553945 SELENOFO60613 162 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 NCR1O76036 304 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 POLR2IP36954 125 aaKnown RBP19.84■□□□□ 0.77
NEK9-203ENST00000553945 LIPAP38571 399 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 NAA10P41227 235 aaPredicted RBP19.84■□□□□ 0.77
NEK9-203ENST00000553945 SLC6A9P48067 706 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 CCL8P80075 99 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 COLCA1Q6ZS62 124 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 SHFQ7M4L6 423 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 HAVCR1Q96D42 359 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 ABHD6Q9BV23 337 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 GABARAPL3Q9BY60 117 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 CGGBP1Q9UFW8 167 aaPredicted RBP19.84■□□□□ 0.77
NEK9-203ENST00000553945 ORC6Q9Y5N6 252 aa19.84■□□□□ 0.77
NEK9-203ENST00000553945 CR1P17927 2039 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 ZSCAN5BA6NJL1 495 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 EI24O14681 340 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 LY6G6DO95868 133 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 RAC2P15153 192 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 NR4A2P43354 598 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 PRKXP51817 358 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 STMN2Q93045 179 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 KCNJ15Q99712 375 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 MSL2Q9HCI7 577 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 DECR2Q9NUI1 292 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 NKIRAS2Q9NYR9 191 aa19.83■□□□□ 0.77
NEK9-203ENST00000553945 VWC2LB2RUY7 222 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 BAG2O95816 211 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 IGHV1-46P01743 117 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 ALPLP05186 524 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 KITLGP21583 273 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 COL8A2P25067 703 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 MALLQ13021 153 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 ZMAT1Q5H9K5 638 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 DRAM2Q6UX65 266 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 FBXW12Q6X9E4 464 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 Q71RC1 249 aaPredicted RBP19.82■□□□□ 0.76
NEK9-203ENST00000553945 BCDIN3DQ7Z5W3 292 aaKnown RBP19.82■□□□□ 0.76
NEK9-203ENST00000553945 PQLC1Q8N2U9 271 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 TMEM163Q8TC26 289 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 RDH5Q92781 318 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 IL4I1Q96RQ9 567 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 AMELYQ99218 206 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 TEAD3Q99594 435 aa19.82■□□□□ 0.76
NEK9-203ENST00000553945 A0A096LNT2 108 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 CCDC182A6NF36 153 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 USF1P22415 310 aaPredicted RBP19.81■□□□□ 0.76
NEK9-203ENST00000553945 OTX1P32242 354 aaPredicted RBP19.81■□□□□ 0.76
NEK9-203ENST00000553945 SLC15A1P46059 708 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 GRB2P62993 217 aaKnown RBP19.81■□□□□ 0.76
NEK9-203ENST00000553945 GGTLC2Q14390 218 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 LCN1P1Q5VSP4 162 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 OR2T2Q6IF00 324 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 OR5AS1Q8N127 324 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 CBR4Q8N4T8 237 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 ZNF283Q8N7M2 679 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 ZNF454Q8N9F8 522 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 ZNF540Q8NDQ6 660 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 OTOSQ8NHW6 89 aa19.81■□□□□ 0.76
NEK9-203ENST00000553945 THEM6Q8WUY1 208 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms