RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 SLCO4A1Q96BD0 722 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 DUS3LQ96G46 650 aaKnown RBP7.17□□□□□ -1.26
PSEN1-209ENST00000553855 PITX2Q99697 317 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 PIMREGQ9BSJ6 248 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 OSBPL10Q9BXB5 764 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 MRPL37Q9BZE1 423 aaKnown RBP7.17□□□□□ -1.26
PSEN1-209ENST00000553855 FN3KQ9H479 309 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 CMC2Q9NRP2 79 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 CYSLTR2Q9NS75 346 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 C14orf119Q9NWQ9 140 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 TAAR3PQ9P1P4 343 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 FZR1Q9UM11 496 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 FBN3Q75N90 2809 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 LRBAP50851 2863 aa7.17□□□□□ -1.26
PSEN1-209ENST00000553855 TACC2O95359 2948 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 H3BSA7 217 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 NDUFS8O00217 210 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 TIMM8AO60220 97 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-209ENST00000553855 NDUFS7O75251 213 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 IGFBP1P08833 259 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SPARCP09486 303 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SLC25A16P16260 332 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SPI1P17947 270 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 TNFSF4P23510 183 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 FPR2P25090 351 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 PYCR1P32322 319 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 CRISP1P54107 249 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 TPTEP56180 551 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 ACTR3P61158 418 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 MALLQ13021 153 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 CCNIQ14094 377 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SNAPC1Q16533 368 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 MEP1BQ16820 701 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 MST1LQ2TV78 715 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 GFOD2Q3B7J2 385 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 PCGF3Q3KNV8 242 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 KLHL12Q53G59 568 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 NKAPLQ5M9Q1 402 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 LCN1P1Q5VSP4 162 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SHFQ7M4L6 423 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 TMEM179BQ7Z7N9 219 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 AMIGO2Q86SJ2 522 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 BIVMQ86UB2 503 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 LINC00346Q8IVM7 164 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 IQCF1Q8N6M8 205 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SLC26A10Q8NG04 563 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 OR4Q3Q8NH05 313 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SLC25A40Q8TBP6 338 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 LRTOMTQ8WZ04 291 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 CENPNQ96H22 339 aaPredicted RBP7.16□□□□□ -1.26
PSEN1-209ENST00000553855 DOK1Q99704 481 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 COQ7Q99807 217 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 ATF6BQ99941 703 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 OR51V1Q9H2C8 321 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 SP140LQ9H930 580 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 HINT3Q9NQE9 182 aaKnown RBP7.16□□□□□ -1.26
PSEN1-209ENST00000553855 DECR2Q9NUI1 292 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 TBCCD1Q9NVR7 557 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 TVP23BQ9NYZ1 205 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 X6R8D5 127 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 PDZD2O15018 2839 aa7.16□□□□□ -1.26
PSEN1-209ENST00000553855 DSCAMO60469 2012 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 AKAP6Q13023 2319 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 LOC100509620A0A075B734 347 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 LOC390937A0A1W2PQ73 354 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 TRIM64A6NGJ6 449 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 TVP23AA6NH52 213 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 TRIM64BA6NI03 449 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 DCTN6O00399 190 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 RER1O15258 196 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 APOC1P02654 83 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 TFP02787 698 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 GAAP10253 952 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 DAOP14920 347 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF250P15622 560 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SELEP16581 610 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 IGFBP5P24593 272 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 ALDH3B1P43353 468 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SLC15A1P46059 708 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SLC6A9P48067 706 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 ENTPD1P49961 510 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 ZNF81P51508 661 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 TNK1Q13470 666 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 KPNB1Q14974 876 aaKnown RBP7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SPATA46Q5T0L3 261 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 CORO6Q6QEF8 472 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 CLEC9AQ6UXN8 241 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-209ENST00000553855 HS3ST5Q8IZT8 346 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 PARP8Q8N3A8 854 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 PAQR4Q8N4S7 273 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-209ENST00000553855 OR51L1Q8NGJ5 315 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 OR6N2Q8NGY6 317 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 PYDC1Q8WXC3 89 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 PTP4A1Q93096 173 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 APOBEC3DQ96AK3 386 aaPredicted RBP7.15□□□□□ -1.26
PSEN1-209ENST00000553855 SORCS2Q96PQ0 1159 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 DIRC2Q96SL1 478 aa7.15□□□□□ -1.26
PSEN1-209ENST00000553855 INTS14Q96SY0 518 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms