RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TMEM246Q9BRR3 403 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM109Q9BVC6 243 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 PCDHAC1Q9H158 963 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM38AQ9H6F2 299 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 NANOGQ9H9S0 305 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 MAN2C1Q9NTJ4 1040 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 VAPAQ9P0L0 249 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 SLC7A7Q9UM01 511 aa6.03□□□□□ -1.44
ATXN3-219ENST00000553488 A0A1W2PRG6 482 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 C5orf63A6NC05 138 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 MCIDASD6RGH6 385 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 PHYHO14832 338 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ABHD16AO95870 558 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 CYB5R3P00387 301 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 IGHV4-59P01825 116 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 PRB2P02812 416 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 OPN1SWP03999 348 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 SFTPBP07988 381 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 CST2P09228 141 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 UMPSP11172 480 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 GPX2P18283 190 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 GSTM3P21266 225 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 TNFSF4P23510 183 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 LAP3P28838 519 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 SDHAP31040 664 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 CFHR2P36980 270 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 AQP2P41181 271 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 PITPNBP48739 271 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 MRPL19P49406 292 aaKnown RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 DAP3P51398 398 aaKnown RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ARHGDIAP52565 204 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 IFFO1Q0D2I5 559 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 TOP3AQ13472 1001 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ENDOGQ14249 297 aaKnown RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 DUSP7Q16829 419 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 TNFAIP8L3Q5GJ75 292 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 FAM201AQ5SY85 155 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 GPR157Q5UAW9 335 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 WDR25Q64LD2 544 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 SLC27A4Q6P1M0 643 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 TTC33Q6PID6 262 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ZNF841Q6ZN19 808 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 Q6ZSV7 163 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 HDDC2Q7Z4H3 204 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 PTOV1Q86YD1 416 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 LDLRAD3Q86YD5 345 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 FUNDC1Q8IVP5 155 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 CLDN22Q8N7P3 220 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ZSCAN4Q8NAM6 433 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 MOSPD2Q8NHP6 518 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ADAMTS16Q8TE57 1224 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 NSMAFQ92636 917 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 MPP4Q96JB8 637 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 MEGF9Q9H1U4 602 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 KCNN2Q9H2S1 579 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 C16orf95Q9H693 158 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 ELOVL3Q9HB03 270 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 TCF7L1Q9HCS4 588 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 C20orf141Q9NUB4 165 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 TBCCD1Q9NVR7 557 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 MIOXQ9UGB7 285 aa6.02□□□□□ -1.45
ATXN3-219ENST00000553488 NDRG4Q9ULP0 352 aaKnown RBP6.02□□□□□ -1.45
ATXN3-219ENST00000553488 LYSTQ99698 3801 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 CENPVL3A0A0U1RRI6 287 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 A0A1B0GWJ7 208 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 TRAPPC13A5PLN9 417 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 GMNCA6NCL1 334 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 BLOC1S5-TXNDC5H3BN57 136 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 IFNL4K9M1U5 179 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 UBDO15205 165 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SURF4O15260 269 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 MLNRO43193 412 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 ENSAO43768 121 aaKnown RBP6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SERPINB7O75635 380 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 OR7A10O76100 309 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SCGB1D2O95969 90 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 IGF2P01344 180 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 MT-ND1P03886 318 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 COX5BP10606 129 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 KITP10721 976 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 TUBG1P23258 451 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SLC6A2P23975 617 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 PSMB10P40306 273 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 PMELP40967 661 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 IER3P46695 156 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 CRYBA2P53672 197 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 VSNL1P62760 191 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 CD47Q08722 323 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 SGCAQ16586 387 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 ZNF181Q2M3W8 571 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 TMEM177Q53S58 311 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 PAGE3Q5JUK9 113 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 NXNQ6DKJ4 435 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 LYPD2Q6UXB3 125 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 OR10AD1Q8NGE0 317 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 OR8B3Q8NGG8 313 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 PFN4Q8NHR9 129 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 AENQ8WTP8 325 aaKnown RBP6.01□□□□□ -1.45
ATXN3-219ENST00000553488 LIPHQ8WWY8 451 aa6.01□□□□□ -1.45
ATXN3-219ENST00000553488 HAVCR1Q96D42 359 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms