RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 FRAS1Q86XX4 4008 aa2.9□□□□□ -1.94
FOXN3-203ENST00000553353 FAM240BA0A1B0GVZ2 78 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 A0A1B0GW55 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TRDV1A0A1B0GX56 115 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF785A8K8V0 405 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 A8MUA0 341 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 A8MXK9 166 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 E7EQL1 145 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 INMT-MINDY4F8WBC2 141 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TO15178 435 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PRKYO43930 277 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 LCMT2O60294 686 aaKnown RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 CRCPO75575 148 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SC5DO75845 299 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ECDO95905 644 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ACTL6AO96019 429 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 OTCP00480 354 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 IFNA14P01570 189 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 APOC1P02654 83 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 MT-ND1P03886 318 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 IGKV3-11P04433 115 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 FABP3P05413 133 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DUX4L2P0CJ85 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DUX4L3P0CJ86 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DUX4L4P0CJ87 422 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DUX4L5P0CJ88 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DUX4L6P0CJ89 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DUX4L7P0CJ90 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SMIM10L1P0DMW3 83 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF708P17019 499 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 MDKP21741 143 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZP3P21754 424 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PRKACGP22612 351 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 GIFP27352 417 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 C21orf33P30042 268 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SLC6A1P30531 599 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PRKAR1BP31321 381 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 RFX3P48380 749 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 KCNJ5P48544 419 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PIK3CGP48736 1102 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 CDC42P60953 191 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SLAMF1Q13291 335 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SNTA1Q13424 505 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 CAMK2DQ13557 499 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF273Q14593 569 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 LARS2Q15031 903 aaKnown RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF79Q15937 498 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TATDN3Q17R31 274 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PRICKLE4Q2TBC4 344 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 AP5B1Q2VPB7 878 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 MAJINQ3KP22 176 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 GPR33Q49SQ1 333 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 NHLRC3Q5JS37 347 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 CLVS2Q5SYC1 327 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SPATA46Q5T0L3 261 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 C10orf25Q5T742 122 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DDI2Q5TDH0 399 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 METTL11BQ5VVY1 283 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SLC22A10Q63ZE4 541 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ELP2Q6IA86 826 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 RGS7BPQ6MZT1 257 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TMEM65Q6PI78 240 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 CD200R1LQ6Q8B3 271 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 B3GLCTQ6Y288 498 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF730Q6ZMV8 503 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 C9orf47Q6ZRZ4 202 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PTCHD4Q6ZW05 846 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PGAP1Q75T13 922 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 GLT6D1Q7Z4J2 308 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 HSD17B13Q7Z5P4 300 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 LDB1Q86U70 411 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SERPINA9Q86WD7 417 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 MSRB3Q8IXL7 192 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TAGAPQ8N103 731 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 LINC00471Q8N535 108 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF740Q8NDX6 193 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TTLQ8NG68 377 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 OR10G3Q8NGC4 313 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 OR4M1Q8NGD0 313 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 VANGL1Q8TAA9 524 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF431Q8TF32 576 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PTPMT1Q8WUK0 201 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ELMO1Q92556 727 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 RBPMSQ93062 196 aaKnown RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 PYCR2Q96C36 320 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ULK4Q96C45 1275 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SMIM10Q96HG1 83 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 FCRL1Q96LA6 429 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SLC6A7Q99884 636 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SEC22CQ9BRL7 303 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TMEM43Q9BTV4 400 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 HDHD5Q9BXW7 423 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 SLC19A3Q9BZV2 496 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 DPY30Q9C005 99 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ZNF436Q9C0F3 470 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 BPESC1Q9GZL8 116 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 TINAGL1Q9GZM7 467 aaPredicted RBP2.9□□□□□ -1.95
FOXN3-203ENST00000553353 OR51E2Q9H255 320 aa2.9□□□□□ -1.95
FOXN3-203ENST00000553353 ALG9Q9H6U8 611 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms