RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TEX13CA0A0J9YWL9 993 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 A0A1B0GWJ7 208 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 IMPA2O14732 288 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 CSF1P09603 554 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 IRF2P14316 349 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 ZNF26P17031 533 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-209ENST00000553308 FPR3P25089 353 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 SLC9A3P48764 834 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RGS6P49758 472 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 NPY4RP50391 375 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RAD23AP54725 363 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 MPPED2Q15777 294 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RABL3Q5HYI8 236 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 METTL11BQ5VVY1 283 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 SFRP4Q6FHJ7 346 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-209ENST00000553308 OAFQ86UD1 273 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 NRMQ8IXM6 262 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 PDZD9Q8IXQ8 264 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 ZSCAN4Q8NAM6 433 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-209ENST00000553308 SCCPDHQ8NBX0 429 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 OR5L1Q8NGL2 311 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 Q8TCH9 128 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 APOBEC3DQ96AK3 386 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-209ENST00000553308 PRRC1Q96M27 445 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 TRIM15Q9C019 465 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 SIRPDQ9H106 197 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RABEP2Q9H5N1 569 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RERGLQ9H628 205 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RHCGQ9UBD6 479 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 RAB21Q9UL25 225 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 A4GNTQ9UNA3 340 aa7.51□□□□□ -1.21
SYNE2-209ENST00000553308 ELOVL7A1L3X0 281 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 PRSS37A4D1T9 235 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 C5orf63A6NC05 138 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 EFCAB9A8MZ26 197 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 XKRYO14609 159 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 CDC42EP2O14613 210 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 PIN1P1O15428 100 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ADAM20O43506 726 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 SLC16A7O60669 478 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 FCN3O75636 299 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 LIPFP07098 398 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 RPL4P36578 427 aaKnown RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 GPR4P46093 362 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 YAP1P46937 504 aaKnown RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 LSM6P62312 80 aaKnown RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 EGR3Q06889 387 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ST3GAL3Q11203 375 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 LRRC23Q53EV4 343 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 SAMD5Q5TGI4 173 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 CD276Q5ZPR3 534 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 DHRS7BQ6IAN0 325 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 NANOGP8Q6NSW7 305 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 GDPGP1Q6ZNW5 385 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 FAM122BQ7Z309 247 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 CALHM3Q86XJ0 350 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 PIP4P2Q8N4L2 257 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 BOLLQ8N9W6 283 aaKnown RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 OR11L1Q8NGX0 322 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ZNF570Q96NI8 536 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ECSITQ9BQ95 431 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 SYT4Q9H2B2 425 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 SEMA6AQ9H2E6 1030 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 RASSF4Q9H2L5 321 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 C16orf95Q9H693 158 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 TMEM100Q9NV29 134 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ERVK-18Q9QC07 812 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 GRHPRQ9UBQ7 328 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ATPIF1Q9UII2 106 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 COA3Q9Y2R0 106 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 POLR1DQ9Y2S0 133 aa7.5□□□□□ -1.21
SYNE2-209ENST00000553308 TET2Q6N021 2002 aaPredicted RBP7.5□□□□□ -1.21
SYNE2-209ENST00000553308 ZNF816-ZNF321PA0A0X1KG74 233 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 HTR3EA5X5Y0 456 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 J3KTA2 159 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 FXYD1O00168 92 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 LGALS8O00214 317 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 OR10H3O60404 316 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 KHDRBS3O75525 346 aaKnown RBP7.49□□□□□ -1.21
SYNE2-209ENST00000553308 CD14P08571 375 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 CD200P41217 278 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 ARF6P62330 175 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 PRKCDQ05655 676 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 COX10Q12887 443 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 KRR1Q13601 381 aaKnown RBP7.49□□□□□ -1.21
SYNE2-209ENST00000553308 OR8B8Q15620 311 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 FAM189A2Q15884 450 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 MEP1BQ16820 701 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 ANKDD1AQ495B1 522 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 CYBRD1Q53TN4 286 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 BEND6Q5SZJ8 279 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-209ENST00000553308 KPRPQ5T749 579 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-209ENST00000553308 CORO6Q6QEF8 472 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 GLB1L2Q8IW92 636 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 OFCC1Q8IZS5 231 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 FGFRL1Q8N441 504 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 CELF2-AS1Q8N7Q2 184 aa7.49□□□□□ -1.21
SYNE2-209ENST00000553308 PNLDC1Q8NA58 520 aaKnown RBP7.49□□□□□ -1.21
SYNE2-209ENST00000553308 ERGIC1Q969X5 290 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms